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ersilia-os
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pharmacogx-embeddings
Pharmacogenomics knowledge graph embeddings and related analyses
GNU General Public License v3.0
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Add Drug Knowledge Graph (DRKG) embeddings
#27
miquelduranfrigola
closed
2 months ago
1
Figure 1 ideas
#26
miquelduranfrigola
opened
4 months ago
0
Try MACAU prediction with side information
#25
miquelduranfrigola
opened
5 months ago
0
Add ADME descriptors to the pipeline
#24
miquelduranfrigola
closed
2 months ago
1
Develop Drug-Variant-Gene triplets pipeline
#23
miquelduranfrigola
closed
4 months ago
1
Test drug-gene pairs pipeline
#22
miquelduranfrigola
opened
6 months ago
4
Zscore by gene
#21
miquelduranfrigola
opened
10 months ago
1
UK Biobank data
#20
miquelduranfrigola
opened
10 months ago
2
GWAS Catalog for variant annotation
#19
miquelduranfrigola
closed
10 months ago
1
Process PharmGKB scripts deprecated?
#18
miquelduranfrigola
closed
10 months ago
1
Select a method to encode variants
#17
miquelduranfrigola
closed
4 months ago
2
Document order of running files
#16
GemmaTuron
closed
10 months ago
2
Variants identifiers and variant pipeline data
#15
miquelduranfrigola
closed
10 months ago
3
Process Automated Annotations files
#14
GemmaTuron
closed
1 year ago
3
Check deduplication of gene - variant in the variant annotation files
#13
GemmaTuron
closed
1 year ago
1
Deduplicate haplotypes
#12
GemmaTuron
closed
1 year ago
4
Add biogeographical groups into relationship table
#11
GemmaTuron
closed
1 year ago
1
Analyse Drug Labels information
#10
GemmaTuron
closed
1 year ago
1
Add Gene IDs
#9
GemmaTuron
closed
1 year ago
1
Map variants to haplotypes in PharmGKB
#8
GemmaTuron
closed
1 year ago
5
Explore databases for genomics in Africa
#7
miquelduranfrigola
closed
6 months ago
1
Update README file
#6
miquelduranfrigola
closed
11 months ago
0
Prompts for BioGPT embeddings
#5
miquelduranfrigola
closed
10 months ago
1
Explore GWAS catalogs
#4
miquelduranfrigola
closed
10 months ago
1
Chemical Checker (and other signatures) for drugs
#3
miquelduranfrigola
closed
1 year ago
1
Download Bioteque embeddings (manual curation)
#2
miquelduranfrigola
closed
10 months ago
2
Write PharmGKB Python API mirroring PharmGKB website
#1
miquelduranfrigola
closed
1 year ago
2