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fractal-analytics-platform
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fractal-tasks-core
Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
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Disable or improve multiple resources in input_paths functionality?
#535
jluethi
closed
5 months ago
1
Add checks on ROI origin
#534
tcompa
closed
11 months ago
1
Fix docs build in CI
#533
tcompa
closed
11 months ago
0
Review label/label-image use in napari-workflows-wrapper task
#532
tcompa
closed
11 months ago
4
Could we only include the `tasks` subpackage when `fractal-tasks` extra is installed?
#531
tcompa
closed
2 months ago
2
Add checks on ROI origin
#530
tcompa
closed
11 months ago
2
Define table specifications V1
#529
tcompa
closed
10 months ago
3
Introduce Pydantic models for NGFF metadata
#528
tcompa
closed
11 months ago
7
Do not use mutable default in `prepare_FOV_ROI_table` and `prepare_well_ROI_table`
#527
tcompa
closed
11 months ago
0
Update new datasets to Zenodo
#526
tcompa
closed
9 months ago
3
`reset_origin` should not modify its input
#525
tcompa
closed
11 months ago
0
Set ROI origin to match well origin
#524
tcompa
closed
11 months ago
11
Adapt to (upcoming) split of metadata/components
#523
tcompa
closed
5 months ago
0
Introduce `import-ome-zarr` task
#521
tcompa
closed
11 months ago
3
Cellpose task doesn't handle 2D MD data anymore
#520
jluethi
closed
11 months ago
2
Fix for race condition in apply_registration_to_image
#517
jluethi
closed
12 months ago
2
Race condition in Apply Registration to image task
#516
jluethi
closed
8 months ago
2
Improve overwrite-related error messages by breaking lines (ref #512)
#515
tcompa
closed
1 year ago
1
Fix list of `plate` components in create_ome_zarr_multiplexing
#514
tcompa
closed
1 year ago
0
Fix plate selection in copy_ome_zarr task
#513
tcompa
closed
1 year ago
4
Improve `OverwriteNotAllowedError` error messages
#512
tcompa
closed
1 year ago
2
Update registration tasks to be overwrite compatible
#511
jluethi
closed
2 months ago
1
Rerunning a workflow with copy OME-Zarr task leads to _mip_mip.zarr files
#510
jluethi
closed
1 year ago
6
Add constraint for fsspec version (ref #508)
#509
tcompa
closed
1 year ago
1
Unpin fsspec
#508
tcompa
closed
11 months ago
0
Review `reset_origin=True` implementation in `convert_ROI_table_to_indices`
#507
tcompa
closed
11 months ago
3
Implement registration for 2D data of the MD
#506
jluethi
opened
1 year ago
1
Fail fast for overwrite-related errors in cellpose/napari-workflows tasks
#505
tcompa
opened
1 year ago
1
Proof of principle napari workflows mock
#504
tcompa
closed
1 year ago
0
[DO NOT MERGE] Proof of principle napari workflows mock
#503
tcompa
closed
1 year ago
1
Proof of principle of mocking `napari_skimage_regionprops` for tests
#502
tcompa
closed
1 year ago
0
Replace loading `.zattrs` file with accessing zarr attrs
#501
tcompa
closed
11 months ago
3
Expand scope of `write_elem` wrapper
#500
tcompa
closed
1 year ago
6
Introduce/update overwrite parameter for most tasks
#499
tcompa
closed
1 year ago
8
Review `overwrite` arguments for registration tasks
#498
tcompa
closed
11 months ago
1
Add `overwrite` argument to napari-workflows task
#497
tcompa
closed
1 year ago
1
Rename `overwrite` argument of illumination-correction task
#496
tcompa
closed
1 year ago
1
Add `overwrite` argument to MIP task
#495
tcompa
closed
1 year ago
1
Add `overwrite` argument to copy-zarr-structure task
#494
tcompa
closed
1 year ago
1
Add `overwrite` argument to create-ome-zarr-structure-multiplexing task
#493
tcompa
closed
1 year ago
1
Add `overwrite` argument to yokogawa-to-zarr task
#492
tcompa
closed
1 year ago
1
Introduce/update `overwrite` parameter to most tasks
#491
tcompa
closed
1 year ago
9
Create pull_request_template.md
#490
tcompa
closed
1 year ago
1
Update poetry lock
#489
tcompa
closed
1 year ago
1
Improve validation of hex code in OmeroChannel
#488
tcompa
closed
1 year ago
2
Create registration task
#487
jluethi
closed
1 year ago
23
Store `docs_info` and `docs_link` in the manifest
#486
ychiucco
closed
1 year ago
11
Add `overwrite` argument to create-ome-zarr-structure task
#485
jluethi
closed
1 year ago
12
Improve validation of hex code in `OmeroChannel`
#484
jluethi
closed
1 year ago
2
minor fix to documentation
#483
ychiucco
closed
1 year ago
1
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