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imminfo
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tcr
[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
https://immunarch.com/
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Error when trying to parse data
#102
asc-2004
closed
4 years ago
1
parsing mixcr 3.0.3 file
#101
ekelley903
closed
5 years ago
4
Problem parsing immunoseq for tcR package -- Error: Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec, : scan() expected 'an integer', got 'nodata'
#100
snedis
closed
5 years ago
1
Parsing immunoseq data for tcR package
#99
snedis
closed
6 years ago
0
Cosine similiarity
#98
erobique
closed
5 years ago
1
Develop
#97
vadimnazarov
closed
6 years ago
0
Sample names in mixcr input
#96
cartal
closed
5 years ago
1
Morista index on duplicate-kept data doesn't work
#95
gavin-kelly-1
closed
5 years ago
1
vis.rarefaction Warning: Ignoring unknown aesthetics: Group
#94
gavin-kelly-1
closed
5 years ago
1
Names of gene segments in tcR
#93
shigekinakagome
closed
5 years ago
1
TRBV6-8 and TRBV6-9 absence form the HUMAN_TRBV set
#92
abbatidanilo
closed
5 years ago
1
importing mixcr dataset
#91
lilycanfly
closed
5 years ago
1
signif.digits in vis.heatmap does not work as espected
#90
tiagobrc
closed
5 years ago
1
Chao1 tcR
#89
tiagobrc
closed
6 years ago
0
Skipping files while parsing
#88
anabbi
closed
5 years ago
1
Differential abundance calculation?
#87
awalsh17
closed
5 years ago
1
V-segments usage plot only shows fixed 50 V？
#86
suntaosimon
closed
7 years ago
0
plot "vis.gene.usage" by "Read.proportion"
#85
suntaosimon
closed
7 years ago
1
pca.segments.2D
#84
suntaosimon
closed
7 years ago
0
New immunoSEQ files won't parse.
#83
this-is-how-we-see
closed
5 years ago
4
tcR conflict with other R packages?
#82
mikessh
closed
5 years ago
0
Issue with name fixes
#81
wyattmcdonnell
closed
5 years ago
1
Gibbs sampler broken
#80
wyattmcdonnell
closed
5 years ago
0
importing mixcr dataset via tcR
#79
zuta-osa77
closed
8 years ago
5
vis.clonal.space bug when applying to groups
#78
vadimnazarov
closed
5 years ago
1
Develop
#77
vadimnazarov
closed
8 years ago
0
Develop
#76
vadimnazarov
closed
8 years ago
0
pca.segments doesn't work with other than HUMAN_TRBV_MITCR segments
#75
vadimnazarov
closed
8 years ago
0
Bug when parsing immunoseq Error in `[.data.frame`(df, , make.names(.reads)) : undefined columns selected
#74
nachocab
closed
5 years ago
1
VJ combination geneUsage result missed the last V and J segments
#73
vixenk
closed
8 years ago
3
from master
#72
vadimnazarov
closed
8 years ago
0
from master
#71
vadimnazarov
closed
8 years ago
0
fix parse.migmap docs
#70
vadimnazarov
closed
8 years ago
0
update version
#69
vadimnazarov
closed
8 years ago
0
Develop
#68
vadimnazarov
closed
8 years ago
0
123
#67
vadimnazarov
closed
8 years ago
0
Unable to parse.vdjtools due to Error
#66
MoentyPython
closed
8 years ago
7
Develop
#65
vadimnazarov
closed
8 years ago
0
Performance of JSD is inconsistent with the raw data(original) verses randomised data
#64
vani10
closed
8 years ago
1
add simplePCA, change pca.segments
#63
Marge-m
closed
5 years ago
2
R CMD check issues
#62
hadley
closed
8 years ago
2
Vis heatmap modification
#61
kvanhoorde
closed
5 years ago
2
Develop
#60
vadimnazarov
closed
8 years ago
0
Additional parameters for function vis.heatmap
#59
kvanhoorde
closed
8 years ago
3
Develop
#58
vadimnazarov
closed
8 years ago
0
Update develop from merging procedures
#57
vadimnazarov
closed
8 years ago
0
Develop
#56
vadimnazarov
closed
8 years ago
0
Modification to function check.distribution (enhancement)
#55
kvanhoorde
closed
8 years ago
1
Modification to function pca.segments.2d (bug) AND function geneUsage (bug)
#54
kvanhoorde
closed
8 years ago
1
function vis.kmer.histogram - additional parameter
#53
kvanhoorde
closed
5 years ago
2
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