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iqbal-lab
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Mykrobe-predictor
Antibiotic resistance predictions in minutes on a laptop
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genotype error
#104
RaSieb
closed
8 years ago
3
Pulling m2 into master
#103
Phelimb
closed
8 years ago
1
Use tmp dir instead of hardcoded /tmp/
#102
Phelimb
closed
5 years ago
0
Wrapping install
#101
iqbal-lab
closed
5 years ago
0
We could do with a new release, no?
#100
iqbal-lab
closed
8 years ago
2
We should document how to parallelise
#99
iqbal-lab
closed
5 years ago
1
Possible floating point error when calculating DFR* thresholds
#98
Phelimb
closed
8 years ago
4
Windows XP
#97
milieuziektes
closed
5 years ago
4
seq_file.c:255: Warning -- plain file starts with non-ACGTN
#96
FelipeMelis
closed
5 years ago
8
Problem with code_generator
#95
FelipeMelis
closed
8 years ago
7
make: *** No rule to make target `src/obj/predictor/main.o', needed by `predictor'. Stop.
#94
FelipeMelis
closed
8 years ago
6
Makefile:153: recipe for target 'predictor' failed
#93
tseemann
closed
8 years ago
7
Report missing WT even when an alternate cannot be found
#92
Phelimb
closed
5 years ago
1
ImportError: cannot import name unique
#91
tseemann
closed
8 years ago
5
Force resistance predictions if species is not target species.
#90
Phelimb
closed
8 years ago
28
Extending
#89
Phelimb
closed
8 years ago
0
Document special case of Clinda output
#88
Phelimb
closed
8 years ago
0
allow amplicon data
#87
stephenturner
closed
8 years ago
5
output documentation & parser
#86
stephenturner
closed
8 years ago
8
Add version string to JSON output
#85
Phelimb
closed
8 years ago
0
Memory leaks in test code
#84
iqbal-lab
closed
8 years ago
2
Unhandled option in switch
#83
iqbal-lab
closed
8 years ago
1
Linezolid support added but incomplete
#82
iqbal-lab
closed
8 years ago
1
Use only virulence genes suggested by Claire Gordon
#81
iqbal-lab
closed
8 years ago
1
Unit tests do not compile on tip of master
#80
iqbal-lab
closed
8 years ago
0
Code to remove from code-generator
#79
iqbal-lab
closed
8 years ago
5
Unhandled case in switch
#78
iqbal-lab
closed
8 years ago
0
Added empirical frequency/CN thresholds to reduce FP
#77
Phelimb
closed
8 years ago
1
Installation Error: 1
#76
AC-genomics
closed
9 years ago
6
Installation Error 1
#75
AC-genomics
closed
9 years ago
1
Don't display r if coverage is better explained by a contaminating species than by target species.
#74
Phelimb
closed
8 years ago
5
Consider adding this diverged mecA to panel
#73
Phelimb
closed
5 years ago
0
Mtb Streptomycin resistance - Balloux mutation
#72
iqbal-lab
closed
5 years ago
0
Docker version
#71
mattbates
closed
8 years ago
0
Added free mask where necessary to fix memory leak. #45
#70
Phelimb
closed
9 years ago
5
del
#69
Phelimb
closed
9 years ago
0
del
#68
Phelimb
closed
9 years ago
0
del
#67
Phelimb
closed
9 years ago
0
Review toxins from PHE
#66
Phelimb
closed
9 years ago
3
Update panel to include the STAPH RESISTANCE snps/genes from PHE, but not non-staph.
#65
Phelimb
closed
9 years ago
2
Add within species contamination check
#64
Phelimb
closed
9 years ago
1
del
#63
Phelimb
closed
9 years ago
2
del
#62
Phelimb
closed
9 years ago
3
Stop printing pyrazinamide results
#61
iqbal-lab
closed
9 years ago
1
Wrong covg in JSON for specific sample
#60
iqbal-lab
closed
9 years ago
1
Missing checks for malloc failures
#59
iqbal-lab
closed
8 years ago
4
Error handling - handle no data
#58
iqbal-lab
closed
5 years ago
0
Issue 55
#57
Phelimb
closed
9 years ago
6
UI issue - better ordering of views/tabs
#56
iqbal-lab
closed
5 years ago
0
Warnings when staph runs without skeleton
#55
Phelimb
closed
9 years ago
0
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