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ncbo
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bioportal-project
Serves to consolidate (in Zenhub) all public issues in BioPortal
BSD 2-Clause "Simplified" License
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Copy current (private) docker_compose.yml file to public repo
#267
graybeal
closed
1 year ago
2
Dockerization Roadmap for BioPortal
#266
graybeal
opened
1 year ago
2
Process and load UMLS 2022AB release
#265
jvendetti
closed
1 year ago
2
AG: class tree visualization issues with AG backend
#264
alexskr
opened
1 year ago
12
linting and rubocop standard
#263
alexskr
opened
1 year ago
1
Can't reprocess NCIT in production without turning off UI traffic
#262
jvendetti
closed
4 months ago
1
AIO: latest submission failed to process - status "Uploaded, Error Rdf"
#261
jvendetti
closed
1 year ago
3
Number of visits metric seems not real
#260
graybeal
opened
1 year ago
0
New submission creation for AIO fails with duplicate resource ID error
#259
jvendetti
closed
1 year ago
1
metrics for class count sometimes gets set as a string instead of an integer
#258
alexskr
opened
1 year ago
3
AG: AllegroGraph operational questions
#257
alexskr
opened
1 year ago
2
what is the proper way to handle ontology parsing errors for "Summary Only" ontologies
#256
alexskr
opened
1 year ago
3
AG: error when processing ontology - Goo::Base::NotValidException: Object is not valid.
#255
alexskr
opened
1 year ago
2
AG: Error during ontologies report paging - ArgumentError: Not supported case for embed
#254
alexskr
closed
7 months ago
3
AG: failures loading ontologies with "RestClient::BadRequest: 400 Bad Request: MALFORMED DATA: ___ is not of type ___"
#253
alexskr
opened
1 year ago
10
unable to remove/disable ontology pull from web UI
#252
alexskr
opened
1 year ago
3
AG: SPARQL::Client::MalformedQuery: MALFORMED QUERY: Line 1, Found '<'.
#251
alexskr
opened
1 year ago
10
AG: process_rdf/Mapping Labels step fails for GAZ, DRON and NCBITAXON
#250
alexskr
opened
1 year ago
0
ATC: REST API not returning parents for some classes
#249
jvendetti
opened
1 year ago
13
migrate to google analytic 4
#248
alexskr
opened
2 years ago
4
HUSAT ontology didn't complete processing
#247
graybeal
closed
2 years ago
4
EuroSciVoc: REST API fails to calculate root classes for this SKOS-format ontology
#246
jvendetti
closed
2 years ago
6
process and load UMLS 2022AA release
#245
alexskr
closed
1 year ago
3
FMA ontology misbehaving
#244
graybeal
closed
2 years ago
1
HGNC-NR latest submission failed to process
#243
jvendetti
closed
2 years ago
2
CADSR-VS latest submission failed to process
#242
jvendetti
opened
2 years ago
4
ruby 2.6 is EOL as of 2022-03-31
#241
alexskr
closed
1 year ago
0
REST API returns empty set for pairwise mappings between BIOLINK and MONDO
#240
jvendetti
opened
2 years ago
3
MedDRA: significant source file size decrease after 2020AB release
#239
jvendetti
opened
2 years ago
2
Incorrect character display for terms in Spanish language SNOMED
#238
jvendetti
opened
2 years ago
0
Remove Resource Index dependency across BioPortal API layer
#237
jvendetti
closed
1 year ago
2
BioPortal U24: provide 4store dump to Lawrence Berkeley National Laboratory
#236
jvendetti
closed
2 years ago
8
Tag Maker
#235
graybeal
opened
2 years ago
0
ontology file downloads of RDF/XML and Diff format should be named after the ontology acronym.
#234
alexskr
opened
2 years ago
0
DRON: BioPortal's nightly pull fails for this ontology
#233
jvendetti
closed
1 year ago
1
Support ontology subsets
#232
cmungall
opened
2 years ago
0
UATC purls wrong
#231
graybeal
closed
3 weeks ago
7
refactor log aggregation/analysis/APM for BioPortal
#230
alexskr
opened
2 years ago
0
refactor OntoPortal CI/CD pipeline
#229
alexskr
closed
6 months ago
1
process and load UMLS 2021AB release
#228
alexskr
closed
2 years ago
4
containerize all ontoportal components
#227
alexskr
opened
2 years ago
0
kljlkl
#226
graybeal
closed
2 years ago
0
MDM: roots endpoint results in 504 gateway time-out error, unable to view classes
#224
jvendetti
opened
2 years ago
2
ECSO ontology not displaying classes/properties
#223
graybeal
closed
2 years ago
1
Figure out how to make New Issues the default lane
#222
graybeal
opened
2 years ago
0
improved troubleshooting for rapper calls
#221
graybeal
opened
2 years ago
0
404 error on classes page for DFO, VFB_DRIVERS ontologies
#220
jvendetti
closed
1 year ago
2
Diff is failing for AFO ontology
#219
jvendetti
closed
2 years ago
1
utilize 'has ontology root term' to hide BFO classes
#218
cmungall
opened
2 years ago
0
BioPortal doesn't upload compressed .ttl format ontologies correctly
#217
alexskr
opened
2 years ago
0
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