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nextstrain
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conda-base
Conda package build for nextstrain-base
https://anaconda.org/Nextstrain/nextstrain-base
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Minimum tsv-utils build number
#76
corneliusroemer
closed
6 days ago
1
tsv-utils raises error in new installation
#75
joverlee521
closed
6 days ago
11
Installation failing
#74
joverlee521
closed
1 week ago
3
Installation: Drop macos-11
#73
joverlee521
closed
1 week ago
1
Drop macos-11 from GH Action workflow
#72
joverlee521
closed
1 week ago
1
Add pathogen-embed as a first-party dependency
#71
huddlej
closed
2 weeks ago
0
Provide GNU coreutils in the runtime
#70
tsibley
closed
3 weeks ago
1
Set default shell
#69
victorlin
closed
1 month ago
0
Switch from boa → rattler-build
#68
tsibley
opened
2 months ago
0
Reference new CI target
#67
victorlin
closed
2 months ago
0
Fix CI
#66
victorlin
closed
2 months ago
0
Installation failing
#65
joverlee521
closed
2 months ago
3
dev: Test installation on macOS 13 and 14 too
#64
tsibley
closed
4 months ago
1
Unpin Biopython
#63
victorlin
closed
5 months ago
0
build(deps): bump actions/download-artifact from 3 to 4
#62
dependabot[bot]
closed
5 months ago
1
build(deps): bump actions/upload-artifact from 3 to 4
#61
dependabot[bot]
closed
5 months ago
1
build(deps): bump actions/checkout from 3 to 4
#60
dependabot[bot]
closed
5 months ago
1
Temporarily disable zika CI
#59
victorlin
closed
5 months ago
0
Update Micromamba install
#58
victorlin
closed
1 month ago
1
CI: Add cache for Micromamba installation
#57
victorlin
closed
5 months ago
2
CI: Transient failures during Micromamba installation
#56
victorlin
closed
1 month ago
5
Remove nextclade3 binary as it can be installed from bioconda
#55
corneliusroemer
closed
5 months ago
1
Transition nextclade 2->3
#54
corneliusroemer
closed
5 months ago
2
fix: pin pulp<2.8, required by snakemake
#53
corneliusroemer
closed
5 months ago
1
Update `nextclade3` to alpha.2
#52
corneliusroemer
closed
5 months ago
0
Pin Biopython 1.81
#51
victorlin
closed
6 months ago
1
Add nextclade3 via direct download
#50
victorlin
closed
6 months ago
1
Pin Snakemake to <8
#49
victorlin
closed
6 months ago
2
Add nextclade2
#48
victorlin
closed
5 months ago
4
Fix setup env
#47
victorlin
closed
7 months ago
2
CI: Rename and disable mpox build
#46
victorlin
closed
8 months ago
0
dev: Temporarily pin ruamel.yaml <0.18.0 to work around Boa's issue
#45
tsibley
closed
8 months ago
2
CI failing with `AttributeError: "safe_load()" has been removed`
#44
victorlin
closed
8 months ago
2
Unpin urllib3, pin anaconda-client>=1.12.0
#43
victorlin
closed
8 months ago
0
dev: Routinely check that the latest* package is initially installable…
#42
tsibley
closed
9 months ago
3
Routinely test that the latest package version is initially installable
#41
tsibley
closed
9 months ago
0
Add nextstrain/rsv to CI
#40
victorlin
closed
11 months ago
1
Different Augur versions between osx-64 and linux-64 subdirs
#39
victorlin
closed
1 month ago
4
macOS 10.14 cannot install any versions after `20230615T171309Z`
#38
joverlee521
closed
9 months ago
5
Exclude snakemake 7.29.0 due to bug
#37
corneliusroemer
closed
1 year ago
4
Add envdir program
#36
tsibley
closed
1 year ago
0
envdir program is missing
#35
tsibley
closed
1 year ago
1
dev: Switch away from the now-deprecated provision-with-micromamba
#34
tsibley
closed
1 year ago
0
dev: Switch to the new setup-micromamba action…
#33
tsibley
closed
1 year ago
1
Download latest main
#32
joverlee521
closed
1 year ago
0
devel/setup: Pin urllib3<2
#31
joverlee521
closed
1 year ago
0
CI release job failing
#30
joverlee521
closed
1 year ago
4
Add .mambarc to speed up index download
#28
corneliusroemer
closed
3 hours ago
2
ci: Test pathogen repo CI builds with the final packages
#27
tsibley
closed
1 year ago
6
`./devel/download-latest` pulls the latest package regardless of label
#26
joverlee521
closed
1 year ago
1
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