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nf-core
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mag
Assembly and binning of metagenomes
https://nf-co.re/mag
MIT License
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Post-release version bump
#586
jfy133
closed
4 months ago
1
Patch release PR: 2.5.4
#585
jfy133
closed
4 months ago
1
Bump version for patch release
#584
jfy133
closed
4 months ago
1
Fix gtdb dirrectory input
#583
jfy133
closed
4 months ago
1
Supplying a directory to --gtdbk-db breaks GTDB-Tk
#582
jfy133
closed
4 months ago
1
Add custom script licences to all tools
#581
jfy133
closed
4 months ago
1
Add StrainXpress assembler
#580
maxibor
opened
4 months ago
0
Process `NFCORE_MAG:MAG:MEGAHIT` terminated with an error exit status (255)
#579
s-junguy
closed
4 months ago
1
Post release bump 254
#578
jfy133
closed
5 months ago
0
2.5.3 patch release
#577
jfy133
closed
5 months ago
1
Bump version for patch release
#576
jfy133
closed
5 months ago
1
Temporary test full profile (until container and tax anno reference files fixed)
#575
jfy133
closed
5 months ago
1
ch_cat_global_summary
#574
maxibor
closed
5 months ago
2
Post-release version bump
#573
jfy133
closed
5 months ago
1
Please make --binning_map_mode group and --ancient-dna compatible features
#572
winklerin
closed
1 month ago
2
Add newer major contributors
#571
jfy133
closed
5 months ago
1
Add license headers to all scripts
#570
jfy133
closed
4 months ago
0
Update devcontainer.json for linting
#569
jfy133
closed
5 months ago
1
Release PR for 2.5.2
#568
jfy133
closed
5 months ago
4
Bump version for 2.5.2 reelase
#567
jfy133
closed
5 months ago
2
Tweak order of MultiQC sections to better match workflow
#566
jfy133
closed
5 months ago
1
Add warning GTDB-TK results will be empty if no contigs pass completeness filter
#565
jfy133
closed
5 months ago
2
Reorder MultiQC sections so all assembly related statistics go together, and all binning statistics go together
#564
jfy133
closed
5 months ago
1
Important! Template update for nf-core/tools v2.12
#563
nf-core-bot
closed
5 months ago
4
Add CAT summary into the global `bin_summary`
#562
maxibor
closed
5 months ago
2
Add CAT summary to bin_summary
#561
maxibor
closed
5 months ago
2
Output directory MEGAHIT already exists, please change the parameter -o to another value to avoid overwriting.
#560
s-junguy
closed
5 months ago
6
Add explicit test for single end data
#559
jfy133
closed
4 months ago
1
Fix malformed input to MEGAHIT with non-run-merged SEdata
#558
jfy133
closed
5 months ago
2
CAT_FASTQ does not work with single end data
#557
roberta-davidson
closed
4 months ago
0
Error with classification
#556
feixiang1209
closed
5 months ago
2
BUSCO summary fails
#555
mtva0001
closed
6 months ago
5
Is there any database we need to download?
#554
feixiang1209
opened
6 months ago
13
Important! Template update for nf-core/tools v2.11
#553
nf-core-bot
closed
5 months ago
1
Can't complete test_full, Error executing process > 'NFCORE_MAG:MAG:PROKKA
#552
medmaca
closed
5 months ago
6
CONCOCT - OpenBLAS Warning
#551
Peter-Kille
closed
1 week ago
4
Adding pipeline nf-tests to nf-core/mag
#550
CarsonJM
opened
6 months ago
2
GTDBTK_SUMMARY: Not a valid path ...
#549
muniheart
closed
5 months ago
5
Patch of #534 into dev for v2.5.1
#548
maxibor
closed
5 months ago
4
process GTDBTK_CLASSIFYWF: glob in find command
#547
muniheart
closed
5 months ago
4
Replacing local modules with nf-core equivalent
#546
CarsonJM
closed
7 months ago
1
BUSCO db placement files not found
#545
lborcard
closed
5 months ago
2
Tiara is not included in bin_summary
#544
maxibor
opened
7 months ago
1
Added ability to auto-create samplesheet for nf-core/phageannotator
#543
CarsonJM
opened
7 months ago
3
Post-release version bump to dev
#542
jfy133
closed
7 months ago
1
Patch release 2.5.1
#541
jfy133
closed
7 months ago
3
Unusual Local Storage Path for Pipeline Info Files in nf-core/mag with AWS S3 Outdir
#540
lennijusten
closed
5 months ago
6
Remove 'dead' extension check code
#539
jfy133
closed
8 months ago
1
Remove redundant QC checks from WorkFlowMag
#538
jfy133
closed
2 months ago
1
Fix input schema to allow direct input again
#537
jfy133
closed
8 months ago
2
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