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nhejazi
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biotmle
:package: :microscope: R/biotmle: Targeted Learning with Moderated Statistics for Biomarker Discovery
https://code.nimahejazi.org/biotmle/
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fixing topTable rownames in modtest_ic
#79
PhilBoileau
closed
3 years ago
0
`SummarizedExperiment` row names don't propagate to `modtest_ic()` output
#78
PhilBoileau
closed
3 years ago
1
simplify parallelization
#77
nhejazi
closed
3 years ago
0
parallelization is a dumpster fire
#76
nhejazi
closed
3 years ago
1
Bioconductor fixes and updates
#75
nhejazi
closed
3 years ago
0
Replace estimation backend
#74
nhejazi
closed
4 years ago
0
Fix sequential evaluation warning
#73
nhejazi
closed
5 years ago
0
update to catch up with tmle dependency changes
#72
nhejazi
closed
5 years ago
0
Warning on 'Sequential evaluation is strongly discouraged. Proceed with caution.'?
#71
HenrikBengtsson
closed
5 years ago
2
Bioc Check Failure
#70
nhejazi
closed
5 years ago
1
Continuous integration fixes
#69
nhejazi
closed
5 years ago
0
Updates and minor modifications
#68
nhejazi
closed
5 years ago
0
CIs based on tail bounds
#67
nhejazi
opened
5 years ago
0
Updates for Bioc3.9 release
#66
nhejazi
closed
5 years ago
0
Simultaneous CIs
#65
nhejazi
opened
5 years ago
0
Fix CI builds
#64
nhejazi
closed
5 years ago
0
Toptable: Error: $ operator not defined for this S4 class
#63
dcpattie
closed
5 years ago
1
Error in eif
#62
dcpattie
closed
5 years ago
1
Error in superheat:
#61
dcpattie
closed
5 years ago
3
Pass optional arguments
#60
nhejazi
closed
5 years ago
1
Allow specification of functional forms for g and Q fits
#59
nhejazi
closed
5 years ago
1
add new tag by BioC request
#58
nhejazi
closed
5 years ago
0
Improve consistency with Bioconductor standards
#57
nhejazi
closed
5 years ago
0
BioC 3.8 - BiocCheck
#56
nhejazi
closed
5 years ago
0
improve heatmap flexibility
#55
nhejazi
closed
5 years ago
0
tibble trouble: fixes heatmap warning
#54
nhejazi
closed
5 years ago
0
Tibble problems in heatmap routine
#53
nhejazi
closed
5 years ago
0
Pass dot arguments correctly
#51
nhejazi
closed
5 years ago
0
normalization option, fix CI, supervised clustering
#50
nhejazi
closed
6 years ago
0
pin devtools sha on travis
#49
nhejazi
closed
6 years ago
0
Robust variance-moderated testing of linear model parameters
#48
nhejazi
closed
5 years ago
1
Implementing supervised distance matrices
#47
nhejazi
closed
5 years ago
1
Backend package transition: tmle -> drtmle
#46
nhejazi
closed
5 years ago
0
Vignette corrections
#45
nhejazi
closed
6 years ago
1
update site + fix travis
#44
nhejazi
closed
6 years ago
1
Fixes need for Matrix objects as output of assay
#43
nhejazi
closed
6 years ago
2
biomarkertmle fails on data transposition
#42
BiaoLiu2017
closed
6 years ago
3
Fixing CI for R 3.5 and BioC 3.7
#41
nhejazi
closed
6 years ago
0
new readme details and links
#40
nhejazi
closed
6 years ago
0
revdep check on wesanderson
#39
karthik
closed
6 years ago
2
succinctly convey analysis results
#38
nhejazi
closed
6 years ago
1
Wishlist for Bioc3.8 Release
#37
nhejazi
closed
5 years ago
1
Backend package transition: drtmle
#36
nhejazi
closed
5 years ago
1
Biocparallel backends
#35
nhejazi
closed
7 years ago
0
Parallelization via future and BiocParallel
#34
nhejazi
closed
7 years ago
0
Develop
#33
nhejazi
closed
7 years ago
0
Using futures with BiocParallel
#32
nhejazi
closed
7 years ago
1
Parallelization via future
#31
nhejazi
closed
7 years ago
1
Outcomes method for biomarkers
#30
nhejazi
closed
5 years ago
4
appveyor build exits with code 5
#29
nhejazi
closed
7 years ago
5
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