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obophenotype
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upheno
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
https://obophenotype.github.io/upheno/
Creative Commons Zero v1.0 Universal
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Should SSPOs be released with their Uberon/CL alignments?
#812
matentzn
opened
2 years ago
1
Add abnormally punctate anatomical entity in location pattern
#811
rays22
closed
2 years ago
3
Add new abnormally punctate anatomical entity in location pattern template
#810
rays22
closed
2 years ago
0
Add abnormally punctate anatomical entity pattern
#809
rays22
closed
2 years ago
2
Add new abnormally punctate anatomical entity pattern template
#808
rays22
closed
2 years ago
0
Explore the possibility of unifying OBA and TO, and uPheno
#807
matentzn
opened
2 years ago
1
Add edematous anatomical entity pattern template
#806
rays22
closed
2 years ago
1
Add new edematous anatomical entity pattern template
#805
rays22
closed
2 years ago
4
Add premature closure of anatomical entity template
#804
rays22
closed
2 years ago
0
Add new premature closure of anatomical entity pattern template
#803
rays22
closed
2 years ago
0
Add asymmetrical anatomical entity template
#802
rays22
closed
2 years ago
0
Add new asymmetrical anatomical entity pattern template
#801
rays22
closed
2 years ago
1
Add a new disorganized anatomical entity template
#800
rays22
closed
2 years ago
0
Add new disorganized anatomical entity pattern
#799
rays22
closed
2 years ago
1
Add irregular density of anatomical entity pattern
#798
rays22
closed
2 years ago
1
Add new irregular density of anatomical entity pattern
#797
rays22
closed
2 years ago
2
Add new hypertrophic anatomical entity pattern
#796
rays22
closed
2 years ago
5
Add new hypertrophic anatomical entity pattern
#795
rays22
closed
2 years ago
2
Add new increased volume pattern template
#794
rays22
closed
2 years ago
1
Add new increased volume of anatomical entity pattern
#793
rays22
closed
2 years ago
2
All patterns should be lower case
#792
matentzn
closed
2 years ago
0
Test commit to check if master aint broken
#791
matentzn
closed
2 years ago
0
Add `abnormallyHyperplasticAnatomicalEntity.yaml`
#790
rays22
closed
2 years ago
5
Add new hyperplastic anatomical entity related pattern
#789
rays22
closed
2 years ago
0
Add abnormally dilated anatomical entity pattern
#788
rays22
closed
2 years ago
0
Add abnormally dilated anatomical entity pattern
#787
rays22
closed
2 years ago
1
Document the pattern merge-replace-old workflow
#786
matentzn
closed
2 years ago
1
Add pattern abnormalColorOfAnatomicalEntityByColor
#785
rays22
closed
2 years ago
0
Update meetings.md
#783
dosumis
closed
2 years ago
0
Modelling seizure
#782
matentzn
opened
2 years ago
1
Inference review
#781
dosumis
opened
2 years ago
0
resistance to whole organism patterns: add organism tab for these?
#780
pfey03
opened
2 years ago
0
OccurrenceOfBiologicalProcessInLocation - can Location be GO CC?
#779
pfey03
closed
2 years ago
2
Fix increased rate of molecular function pattern description
#778
pfey03
opened
2 years ago
1
new patterns: abnormal/decreased/increasedProteinLocalizationInCellularComponent
#777
pfey03
closed
3 years ago
2
Aim 1.1.2 Refactor and align existing phenotype ontologies
#776
matentzn
closed
3 years ago
0
Aim 1.1.1 Build a library of phenotype term templates.
#775
matentzn
closed
3 years ago
0
Phenotype definition editor
#774
matentzn
closed
3 years ago
0
Tooling to find and edit templates
#773
matentzn
closed
3 years ago
0
Build uPheno
#772
matentzn
closed
3 years ago
0
Use term templates to bootstrap new phenotype ontologies
#771
matentzn
closed
3 years ago
0
Refactor and align existing phenotype ontologies
#770
matentzn
closed
3 years ago
0
Build a library of phenotype term templates.
#769
matentzn
closed
3 years ago
0
Aim 1.4 Develop templates for new kinds of phenotypes
#768
matentzn
closed
3 years ago
0
Aim 1.3 Extend and improve the semantic infrastructure required for phenotype ontology development
#767
matentzn
closed
3 years ago
0
Aim 1.2 Develop tools to improve the efficiency and quality control of templated-based phenotype ontology development
#766
matentzn
closed
3 years ago
0
Aim 1.1. Develop, apply and evaluate a library of uPheno term templates in collaboration with phenotype ontology developers
#765
matentzn
closed
3 years ago
0
Using 'efficacy' instead of 'rate' in patterns
#764
rays22
closed
3 years ago
0
Protein localisation patterns should use efficacy and not rate
#763
matentzn
closed
3 years ago
1
Protein localization phenotype design patterns
#762
rays22
closed
3 years ago
3
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