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ococrook
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hdxstats
hdxstats: An R-package for statistical analysis of hydrogen deuterium exchange mass-spectrometry data.
Apache License 2.0
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Update functionalAnalysis-plots.R
#45
nlgittens
closed
1 year ago
1
hdxdifference function - a suggestion
#44
nlgittens
closed
1 year ago
2
hdxdifference p-value signs
#43
nlgittens
closed
1 year ago
1
Residue start and end in ComputeAverageMap function
#42
nlgittens
closed
1 year ago
1
Replace use of print with `rlog` functions for baseline `hdxstats` modules. Assign: @ococrook
#41
broncio123
opened
1 year ago
0
Replace the use of slots with Accessors, as suggested in Bioconductor guidelines. Assign: @broncio123
#40
broncio123
closed
1 year ago
0
xticklabels in manhattan plot now showing single residue numbers instead of an interval
#39
broncio123
closed
1 year ago
0
Outstanding issues for HDX streamline features
#38
broncio123
opened
1 year ago
3
plotEpitopeMap peptides too long
#37
nlgittens
closed
1 year ago
1
processFunctional error
#36
nlgittens
closed
1 year ago
2
object undefined in hdxdifference function
#35
broncio123
closed
1 year ago
3
Is hmpplot functional?
#34
nlgittens
closed
1 year ago
1
swapped print with return in foresplot function
#33
broncio123
closed
1 year ago
0
swapped print with return in foresplot function
#32
broncio123
closed
1 year ago
0
Add routines for normalisation by time intercept and 'undeuterated' peptide mass into normalisehdx
#31
broncio123
closed
1 year ago
2
small fix
#30
broncio123
closed
1 year ago
0
small fix
#29
broncio123
closed
1 year ago
0
Add residue numbers to average plots and heatmap plots
#28
broncio123
closed
1 year ago
1
volcanoe plot
#27
ococrook
opened
2 years ago
0
AAString + Start & End residues
#26
nlgittens
closed
1 year ago
2
Develop olly
#25
broncio123
closed
2 years ago
0
Merge developOlly into develop
#24
broncio123
closed
2 years ago
0
FitUptakeKinetics - error messages
#23
nlgittens
closed
2 years ago
12
Develop olly
#22
ococrook
closed
2 years ago
0
bioconductor check
#21
ococrook
opened
2 years ago
0
manhattan documentation
#20
ococrook
closed
1 year ago
0
update readme
#19
ococrook
closed
2 years ago
0
pull request from main into Broncio's develop branch
#18
broncio123
closed
2 years ago
0
Unit testing (later)
#17
broncio123
closed
1 year ago
0
Define additional features for developement (discussion)
#16
broncio123
opened
2 years ago
1
Vignette's content enhancements
#15
broncio123
opened
2 years ago
2
Glossary (optional)
#14
broncio123
opened
2 years ago
0
Add executing scripts as part of tutorials or examples of use
#13
broncio123
opened
2 years ago
0
Fix documentation formatting
#12
broncio123
opened
2 years ago
0
Vignettes should be broken down
#11
broncio123
opened
2 years ago
1
Develop olly
#10
ococrook
closed
2 years ago
0
3D structure viewer
#9
ococrook
closed
1 year ago
5
Manhatten plot - multiple charge states
#8
nlgittens
opened
2 years ago
8
Residue plot colours
#7
ococrook
closed
1 year ago
5
Exporting results
#6
ococrook
closed
2 years ago
2
Heat map cosmetics
#5
nlgittens
closed
2 years ago
1
%D uptake vs #D uptake
#4
nlgittens
closed
2 years ago
3
Deuterium uptake plotting - linear vs semi-log
#3
nlgittens
closed
2 years ago
3
fix typo
#2
Adafede
closed
2 years ago
1
fix typo
#1
lgatto
closed
2 years ago
1