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Issue tracker for Open Targets Platform and Open Targets Genetics Portal
https://platform.opentargets.org https://genetics.opentargets.org
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Targets on FTP are sometimes annotated with fewer GO terms than on the production Platform
#3177
fedde-s
closed
6 months ago
2
[PPP API]: Disease `otarProjects` failing on api request
#3176
carcruz
closed
6 months ago
0
HTML tags in literature sentences
#3175
DSuveges
opened
7 months ago
3
Cooccurrences are not identified from sentences, although entities are identified
#3174
DSuveges
opened
7 months ago
5
Managing GWAS Catalog study QC/flags
#3173
DSuveges
closed
5 months ago
1
Multiple ensembl IDs with the same approved symbol
#3172
mkarmona
opened
7 months ago
8
Capture cohort information in study index
#3171
DSuveges
closed
7 months ago
0
Working on a second iteration of the upload functionality
#3170
buniello
closed
3 months ago
2
Add PPP evidence step to PIS
#3169
jdhayhurst
closed
6 months ago
0
Issue in loading ChEMBL widget
#3168
prashantuniyal02
opened
7 months ago
1
Metrics app requires full reboot to fetch new data
#3167
tskir
closed
7 months ago
0
Downloading data not working for server side paginated widgets
#3166
prashantuniyal02
closed
7 months ago
1
Correct version number in the exported file name
#3165
prashantuniyal02
closed
7 months ago
4
Harmonise pharmacogenetics associations that refer to star alleles
#3164
ireneisdoomed
closed
3 months ago
11
Error fetching chembl 33 data
#3163
remo87
closed
7 months ago
0
Ingest UK Biobank — SAIGE dataset
#3162
tskir
closed
3 months ago
0
Ingest pQTL data from UK Biobank
#3161
tskir
closed
4 months ago
2
Adding data sorting functionality to the ClinVar widget
#3160
buniello
opened
7 months ago
2
GWAS Catalog harmonised sumstats are incompatible with `SummaryStatistics` schema
#3159
ireneisdoomed
closed
7 months ago
3
Standardise data processing levels for the Genetics ETL
#3158
tskir
opened
7 months ago
7
QC locus to gene gold standards processing
#3157
ireneisdoomed
closed
3 months ago
6
Public documentation edits needed for 23.12
#3156
buniello
closed
5 months ago
3
Increase performance of external data partitioning
#3155
tskir
closed
7 months ago
4
Cluster dies when running big workloads
#3154
tskir
closed
7 months ago
7
Gathering feedback on the new 'Export' and 'Pinning' functionalities in AOTF (23.12 release)
#3153
buniello
closed
5 months ago
9
Incorrect parsing of GWASCat curated studies
#3152
ireneisdoomed
closed
7 months ago
1
StudyLocus dataset contains multiple rows with the same ID
#3151
ireneisdoomed
closed
7 months ago
0
Malformed URL does not redirect to error page
#3150
ireneisdoomed
closed
6 months ago
0
Bug on the PharmGKB data as handled by the data provider
#3149
buniello
closed
3 months ago
6
Add extra elastic search endpoints to chembl-inputs
#3148
mjfalaguera
opened
8 months ago
2
Moving ChEMBL, IMPC, ClinVar (somatic) to server side pagination widget to server side pagination
#3147
prashantuniyal02
closed
7 months ago
0
Make annotation of L2G features agnostic of what features to include
#3146
ireneisdoomed
opened
8 months ago
0
Fix bug in Spark master URI configuration
#3145
tskir
closed
7 months ago
0
Styling bug on indication therapeutic area
#3144
d0choa
closed
7 months ago
1
Update Airflow documentation following testing
#3143
tskir
closed
8 months ago
0
Implement and test cluster autoscaling in Airflow architecture
#3142
tskir
closed
8 months ago
1
Generalize how LD references are handled by the etl
#3141
DSuveges
opened
8 months ago
1
Re-enable and fix the `test_no_import_errors` Airflow DAG test
#3140
tskir
closed
8 months ago
0
Changing the default size from 25 to a higher number in multiple widgets in AOTF
#3139
prashantuniyal02
closed
7 months ago
2
Updating protvista-uniprot from 2.8.3 to 2.10.9
#3138
prashantuniyal02
closed
3 months ago
1
Wrong chemical structure for TRAMIPROSATE
#3137
polrus
opened
8 months ago
1
Post-ETL data investigations for 23.12
#3136
tskir
closed
7 months ago
1
[Platform] Pancreas disease is uncorrectly annotated as Therapeutic area in efo_otar_slim.owl
#3135
louwenjjr
opened
8 months ago
0
Cancer driver gene widget for all diseases on the Target Prioritisation view crashes in PPP
#3134
prashantuniyal02
closed
7 months ago
1
Fix the link to the Genetics Portal FTP downloads
#3133
tskir
closed
8 months ago
0
Refactor step configuration
#3132
tskir
closed
8 months ago
0
"Productionizing" LD matrix extraction based on StudyLocus objects
#3131
DSuveges
closed
2 months ago
2
Window based clumping needs to be generalized to studyLocus objects
#3130
DSuveges
closed
2 months ago
0
Review and refactor comparison between Tabula and GTEx data
#3129
tskir
closed
8 months ago
0
Process PharmGKB data based on latest discussions
#3128
ireneisdoomed
closed
7 months ago
3
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