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owlcollab
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owltools
OWLTools
BSD 3-Clause "New" or "Revised" License
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Error: owltools.cli.CommandLineInterface
#277
pbuttigieg
closed
5 years ago
12
Hard-coded URLs (e.g. GO.xrf_abbs) affected by root domain change
#276
kltm
closed
5 years ago
11
Add new properties to default biochebi input file.
#275
balhoff
closed
5 years ago
0
Add primary input/output relations to BioChebi.
#274
balhoff
closed
5 years ago
0
Fix some tests; disable many tests; at least have tests running.
#273
balhoff
closed
5 years ago
2
Duplicated entries after map2slim
#272
KristinaGagalova
opened
5 years ago
0
Add relations to BioChebiGenerator
#271
balhoff
closed
5 years ago
0
Current master build tests fail (commit a69a05a3002c444dc8625c704d936b52a23e47b6)
#270
RichardBruskiewich
closed
5 years ago
1
Migrate owltools dependencies from code.berkeleybop.org to GitHub
#269
kltm
opened
5 years ago
0
fix off-by-one error in the panther arbre file parser
#268
kltm
closed
5 years ago
2
Add option to avoid macro expansion when using species subsetter util.
#267
balhoff
closed
5 years ago
0
Upgrading jetty
#266
cmungall
closed
4 years ago
0
upgrade owlapi
#265
cmungall
closed
5 years ago
3
remove phylo_graph_json from solr loader; work on geneontology/amigo#542
#264
kltm
closed
5 years ago
0
map2slim memory requirements
#263
emrobe
opened
5 years ago
0
ClassCastException / crash when running --make-species-subset
#262
kimrutherford
opened
6 years ago
7
Error in using OWLTools-Core maven dependency
#261
marwa811
closed
6 years ago
0
Exception running owltools --make-species-subset
#260
kimrutherford
closed
6 years ago
1
WIP: Adding ability to tag inferrable SubClassOf axioms
#259
cmungall
closed
6 years ago
0
WIP: curie-util
#258
cmungall
closed
6 years ago
1
Add GO term created_by and creation_date into loader for GOlr
#257
kltm
opened
6 years ago
4
Unstable output for owltools --save-closure-for-chado
#256
kimrutherford
opened
6 years ago
8
Error when convert
#255
ypriverol
opened
6 years ago
0
Revised solr document loader codes to deep-copy all relevant ontologies
#254
yy20716
opened
6 years ago
0
Correct label and biological process issues for model annotation loader, possible other improvements
#253
kltm
opened
6 years ago
16
refactor identifiers to use CurieUtil
#252
cmungall
opened
6 years ago
0
Ensuring that the getIdentifier fix from #247 is used for all entrypo…
#251
cmungall
closed
6 years ago
0
Bash fixes for Mac (10.12) compatibility
#250
safisher
opened
6 years ago
1
Fixed the null exception error in GetIdentifier
#249
yy20716
closed
6 years ago
0
Fail to extract terms from IAO and ENVO
#248
bjonnh
closed
6 years ago
2
Revised getIdentifier method to use oboInOwl#id for non-obolibrary PURLs
#247
yy20716
closed
6 years ago
0
Fixed memory leaks that arise while generating solr index entries
#246
yy20716
closed
6 years ago
10
getIdentifier should work with non-obolibrary PURLs (required for solr loading)
#245
cmungall
closed
6 years ago
6
Converting gaf/gpad to ttl(owl) format
#244
cybersiddhu
opened
6 years ago
3
Extend solr loader to populate new closure fields
#243
cmungall
opened
6 years ago
2
Added codes for generating regulation-only closures
#242
yy20716
opened
6 years ago
1
Add code to populate regulates-strict closure
#241
cmungall
opened
6 years ago
0
Added codes that ensure mapping between properties and ids
#240
yy20716
closed
6 years ago
0
Add codes that check the return value of getGoSubOntology in the initialization routine of aspectMap.
#239
yy20716
closed
6 years ago
0
GAF inference are incomplete because of incorrect mapping for part_of
#238
cmungall
opened
6 years ago
5
Ensure owltools produces correct aspect when generating predicted GAFs
#237
cmungall
opened
6 years ago
2
Remint
#236
cmungall
opened
6 years ago
0
Relax/remove model check to allow loading
#235
kltm
closed
6 years ago
0
SolrCommandRunner should skip models that are unsatisfiable
#234
kltm
opened
6 years ago
6
minimal attempt at fixing #232 (lego catalogs)
#233
kltm
closed
6 years ago
1
Command --solr-load-models unecessarily fails when there is no provided "lego" catalog
#232
kltm
closed
6 years ago
4
Tr axiom
#231
cmungall
closed
6 years ago
0
new command: copy-axiom (rewrite source axioms in terms of target, check for incoherency)
#230
cmungall
closed
6 years ago
0
Should TableRenderer include properties?
#229
balhoff
opened
6 years ago
5
Add prefix definition
#228
stuppie
opened
6 years ago
2
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