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sourmash-bio
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sourmash
Quickly search, compare, and analyze genomic and metagenomic data sets.
http://sourmash.readthedocs.io/en/latest/
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MRG: propagate error from `RocksDB::open` on bad directory
#3306
ctb
closed
2 months ago
7
MRG: add `Manifest::intersect_manifest` to Rust core
#3305
ctb
closed
2 months ago
11
r0.15.1 release
#3304
luizirber
closed
3 months ago
1
EXP: try getting standalone manifests working in Rust core
#3303
ctb
closed
2 months ago
2
Bump serde_json from 1.0.124 to 1.0.125
#3302
dependabot[bot]
closed
3 months ago
2
Bump camino from 1.1.7 to 1.1.9
#3301
dependabot[bot]
closed
3 months ago
1
Bump js-sys from 0.3.69 to 0.3.70
#3300
dependabot[bot]
closed
3 months ago
2
Bump web-sys from 0.3.69 to 0.3.70
#3299
dependabot[bot]
closed
3 months ago
1
Bump serde from 1.0.207 to 1.0.208
#3298
dependabot[bot]
closed
3 months ago
1
MRG: misc Rust updates to core
#3297
ctb
closed
3 months ago
3
Resolved issue for high precision MLE estimation
#3296
LucaCappelletti94
closed
3 months ago
2
HLL/MLE estimator bug
#3295
LucaCappelletti94
closed
3 months ago
3
HLL improved estimator
#3294
jianshu93
opened
3 months ago
0
Added union method to HLL
#3293
LucaCappelletti94
closed
3 months ago
4
EXP: Added derives for mem-dbg
#3292
LucaCappelletti94
opened
3 months ago
7
Can sourmash be used to remove microbal contamination from long reads?
#3291
spoonbender76
opened
3 months ago
0
[pre-commit.ci] pre-commit autoupdate
#3290
pre-commit-ci[bot]
closed
3 months ago
1
Bump serde from 1.0.204 to 1.0.207
#3289
dependabot[bot]
closed
3 months ago
2
Bump serde_json from 1.0.122 to 1.0.124
#3288
dependabot[bot]
closed
3 months ago
2
Bump tempfile from 3.11.0 to 3.12.0
#3287
dependabot[bot]
closed
3 months ago
1
MRG: update plugin documentation for users
#3286
ctb
closed
3 months ago
2
if we deprecate a plugin, is it sensible to release a version of the plugin that removes the entry point?
#3285
ctb
opened
3 months ago
1
Multisearch Threshold and Output Matches
#3284
agombolay
closed
3 months ago
12
new GenBank databases: draft
#3283
ctb
opened
3 months ago
1
explore `xz` compression format?
#3282
ctb
opened
3 months ago
0
[pre-commit.ci] pre-commit autoupdate
#3281
pre-commit-ci[bot]
closed
3 months ago
1
Bump serde_json from 1.0.121 to 1.0.122
#3280
dependabot[bot]
closed
3 months ago
2
Bump tempfile from 3.10.1 to 3.11.0
#3279
dependabot[bot]
closed
3 months ago
1
Bump pypa/cibuildwheel from 2.19.2 to 2.20.0
#3278
dependabot[bot]
closed
3 months ago
2
Bump myst-parser from 3.0.1 to 4.0.0
#3277
dependabot[bot]
closed
3 months ago
2
Bump sphinx-design from 0.6.0 to 0.6.1
#3276
dependabot[bot]
closed
3 months ago
2
Implement resumability for revindex
#3275
luizirber
closed
3 months ago
2
sourmash release v4.8.11
#3274
luizirber
opened
3 months ago
2
v4.8.11 release branch
#3273
luizirber
closed
3 months ago
1
2024 ICPPB LIN taxonomy tutorial
#3272
bluegenes
opened
3 months ago
0
plugin version command
#3271
bluegenes
closed
3 months ago
3
[pre-commit.ci] pre-commit autoupdate
#3270
pre-commit-ci[bot]
closed
3 months ago
1
Update sphinx requirement from <8,>=6 to >=6,<9
#3269
dependabot[bot]
closed
3 months ago
5
Bump sphinx-design from 0.5.0 to 0.6.0
#3268
dependabot[bot]
closed
3 months ago
1
Bump serde_json from 1.0.120 to 1.0.121
#3267
dependabot[bot]
closed
3 months ago
2
Bump moonrepo/setup-rust from 0 to 1
#3266
dependabot[bot]
closed
3 months ago
1
Bump actions/checkout from 3 to 4
#3265
dependabot[bot]
closed
3 months ago
2
Bump CodSpeedHQ/action from 2 to 3
#3264
dependabot[bot]
closed
3 months ago
3
ahash cyclic dependence with the js feature for getrandom crate
#3263
jianshu93
closed
3 months ago
7
CI: enable codspeed for Python
#3262
luizirber
opened
4 months ago
2
rust lints beta CI check is failing on `latest`
#3261
ctb
closed
3 months ago
1
[pre-commit.ci] pre-commit autoupdate
#3260
pre-commit-ci[bot]
closed
4 months ago
1
Bump DeterminateSystems/nix-installer-action from 12 to 13
#3259
dependabot[bot]
closed
4 months ago
2
Update pytest requirement from <8.3.0,>=6.2.4 to >=6.2.4,<8.4.0
#3258
dependabot[bot]
closed
4 months ago
2
Bump thiserror from 1.0.62 to 1.0.63
#3257
dependabot[bot]
closed
4 months ago
2
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