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risk-networks
Code for risk networks: a blend of compartmental models, graphs, data assimilation and semi-supervised learning
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resolved errors with new epidemic_model/health_service
#100
odunbar
closed
4 years ago
0
No more `DiurnalContactInceptionRate`?
#99
agarbuno
closed
4 years ago
2
Two classes "Observations"
#98
dburov190
closed
4 years ago
2
Removes multithreaded loop over contacts in contact simulation
#97
glwagner
closed
4 years ago
1
Fix syntax in an example
#96
dburov190
closed
4 years ago
1
Is the Ensemble Kalman updating states correctly?
#95
odunbar
closed
4 years ago
1
Proofreads and updates comments and docstrings
#94
glwagner
closed
4 years ago
0
Lb/user base visu
#93
lubo93
closed
4 years ago
7
Use function closure `not_involving` rather than callable class `NotInvolving` for filtering patient-connected edges
#92
glwagner
closed
4 years ago
0
Infinite patient capacity
#91
glwagner
closed
4 years ago
2
EpidemicSimulator faces reproducibility issues again
#90
lubo93
closed
4 years ago
6
Issues raised in (June 7th)
#89
odunbar
opened
4 years ago
1
New ContactSimulator
#88
glwagner
closed
4 years ago
12
added user base to NYC DA example
#87
odunbar
closed
4 years ago
0
Can hospital_seeking be anything other than a list?
#86
glwagner
closed
4 years ago
2
Perfect hospital (seekers) and death observations
#85
agarbuno
closed
4 years ago
0
Exogenous infections
#84
odunbar
opened
4 years ago
1
Extending the `simulate_idealized_NYC_epidemic_with_DA.py` example
#83
odunbar
opened
4 years ago
0
NYC with data assimilation
#82
odunbar
closed
4 years ago
0
MasterEquationModelEnsemble testing on large networks?
#81
odunbar
opened
4 years ago
0
No cycle_contacts in epidemic_simulator.py
#80
glwagner
closed
4 years ago
1
Cycle_contacts is an unnecessary feature
#79
odunbar
closed
4 years ago
0
Delete fast_contact_simulator.py
#78
glwagner
closed
4 years ago
3
Rm fast contact simulator
#77
glwagner
closed
4 years ago
0
Improved UserBase with measurements
#76
odunbar
closed
4 years ago
9
Observations and Measurements
#75
agarbuno
closed
4 years ago
1
Added UserBase and examples
#74
odunbar
closed
4 years ago
0
Package name "epiforecast" may be a misnomer
#73
glwagner
opened
4 years ago
3
Do we need node identifiers?
#72
glwagner
opened
4 years ago
9
Utils for setting numba random seed
#71
glwagner
closed
4 years ago
4
Numba seed/reproducibility issue
#70
lubo93
closed
4 years ago
0
Multi-stage social distancing for NYC simulation
#69
lubo93
closed
4 years ago
4
Ag/backwards master eqns
#68
agarbuno
closed
4 years ago
0
Change transition rates for NYC scenario to age dept constants
#67
glwagner
closed
4 years ago
0
Contact-specific, non-stationary birth/death simulation with rejection sampling and a Gillespie algorithm
#66
glwagner
closed
4 years ago
6
NYC example with SD intervention and modified contact simulator
#65
lubo93
closed
4 years ago
12
The EpidemicSimulator
#64
glwagner
closed
4 years ago
1
Lb/networks without beds
#63
lubo93
closed
4 years ago
1
Avoid assumption that nodes are a simple range
#62
glwagner
closed
4 years ago
5
`ContactSimulator` is too slow
#61
glwagner
closed
4 years ago
2
KeyError in in Gillespie_simple_contagion
#60
glwagner
closed
4 years ago
2
Health service
#59
odunbar
closed
4 years ago
2
NYC example with plot --- works with 1e3 nodes; serious KeyError
#58
lubo93
closed
4 years ago
6
End time for Gillespie_simple_contagion is *not* tmax
#57
glwagner
opened
4 years ago
0
Lb/kinetic model parameter changes
#56
lubo93
closed
4 years ago
5
Removes placeholders from kinetic model and speeds up contact simulator
#55
glwagner
closed
4 years ago
4
description of vacate_hopsital_bed function
#54
lubo93
closed
4 years ago
1
Uniquely identify people with nodes; use HealthService to manage hospitalization
#53
glwagner
closed
4 years ago
1
HealthService to handle patient movements due to hospitalization
#52
odunbar
closed
4 years ago
2
Integrated ContactSimulator and KineticModel simulation
#51
glwagner
closed
4 years ago
10
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