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timjmiller
/
wham
State-space, age-structured fish stock assessment model
https://timjmiller.github.io/wham
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Build MSE functionality on multi-wham
#86
lichengxue
closed
6 months ago
0
Error in plot.window(...) : need finite 'ylim' values
#85
jimianelli
closed
6 months ago
2
Run Ex2 fit_wham() with error " the condition has length > 1"
#84
jutubuzou
closed
7 months ago
1
minor bug in par_table_fn.R function
#83
JDeroba
closed
10 months ago
1
Allow WAA inputs for projections
#82
CPerretti
closed
11 months ago
0
Allow WAA inputs for projections
#81
CPerretti
closed
11 months ago
0
Issue when simulating paa and age-specific selectivity == 0
#80
GiancarloMCorrea
closed
1 year ago
5
edit README
#79
ricardd
closed
1 year ago
1
Growth
#78
GiancarloMCorrea
closed
1 year ago
0
Linear-DM with additional documentation
#77
James-Thorson
closed
1 year ago
1
Issue when calculating nll for compositional data
#76
GiancarloMCorrea
closed
1 year ago
1
First stab at adding linear-DM
#75
James-Thorson-NOAA
closed
1 year ago
0
Growth
#74
GiancarloMCorrea
closed
1 year ago
2
Incorrect indexing for CAA simulation?
#73
ahart1
closed
1 year ago
1
Bug when running retros
#72
GiancarloMCorrea
closed
1 year ago
1
Inputting new parameters (par = ) into simulate() function
#71
emilylil
closed
4 months ago
2
data$n_fleets in set_catch is hard wired to 1 fleet
#70
chengmatt
closed
1 year ago
2
Project_wham doesn't work when only 1 WAA matrix in data due to indexing error
#69
ahart1
closed
4 months ago
2
FXSPR_Static
#68
kcurti
closed
1 year ago
1
paa and do_osa
#67
GiancarloMCorrea
closed
2 years ago
1
Adding multivariate-Tweedie likelihood
#66
James-Thorson-NOAA
closed
2 years ago
3
multivariate-Tweedie likelihood
#65
James-Thorson-NOAA
closed
2 years ago
9
Error index age comps
#64
GiancarloMCorrea
closed
2 years ago
1
Question About WHAM and ASAP
#63
GNelson12
closed
2 years ago
2
Request ADREPORT for logit_q_mat
#62
Cole-Monnahan-NOAA
closed
2 years ago
5
selectivity re="ar1" with model = "age-specific" options to prepare_wham_input function
#61
timjmiller
closed
4 months ago
12
for age-specific selectivity allow user-specified ages that share the same parameters
#60
timjmiller
closed
4 months ago
6
allow same selectivity blocks for different fleets/indices
#59
timjmiller
closed
4 months ago
2
Expanding the Dirichlet Multinomial Library
#58
emilylil
closed
2 years ago
5
Advice on Ecov for catchability options
#57
Cole-Monnahan-NOAA
closed
2 years ago
6
Small bug when selex of oldest age = 0 and N1_model = 1 is used
#56
GiancarloMCorrea
closed
2 years ago
2
Small bug in N1_model=1 on R side
#55
Cole-Monnahan-NOAA
closed
2 years ago
3
Update to NOAA themed pkgdown landing site
#54
haleyoleynik
closed
2 years ago
1
Bug in `rdirmultinom`
#53
James-Thorson-NOAA
closed
2 years ago
1
Different ecov obs error options for multiple ecovs
#52
brianstock
closed
2 years ago
1
table of parameter estimates
#51
timjmiller
closed
2 years ago
2
Report abundance or total biomass | HTML results
#50
ejosymart
closed
3 years ago
6
Dirichlet sampling within rdirmultinom
#49
seananderson
closed
3 years ago
2
do.fit error for butterfish
#48
brianstock-NOAA
closed
3 years ago
2
check_estimability error
#47
brianstock-NOAA
closed
3 years ago
1
log catch/index residuals do not use bias correction
#46
brianstock-NOAA
closed
3 years ago
1
error reporting within fit_wham and fit_tmb
#45
timjmiller
closed
3 years ago
2
prepare_wham_input not providing correct selectivity configuration with double-logistic option
#44
timjmiller
closed
3 years ago
1
first version of read_asap3_fit
#43
liz-brooks
closed
3 years ago
0
HTML results not showing
#42
JDeroba
closed
3 years ago
12
plot multiple projections
#41
JDeroba
closed
3 years ago
3
Plot_wham_output() missing variable yr.col
#40
tcarruth
opened
3 years ago
2
Ex1 warnings
#39
brianstock-NOAA
closed
3 years ago
0
pred_IAA is expected in terms of numbers on R side
#38
timjmiller
closed
3 years ago
0
Question: should ragged IAA_mats (varying ages) work by using index_sel_start_age and index_sel_end_age?
#37
tcarruth
opened
3 years ago
2
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