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hyphy
HyPhy: Hypothesis testing using Phylogenies
http://www.hyphy.org
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Absrel error
#1670
WRran-Hydrogen
closed
6 months ago
6
aBSREL foreground lineages
#1669
JuliaLopezDelgado
closed
4 months ago
17
results isuue and running error
#1668
fatima-akhtar113
closed
3 months ago
20
Bug in FEL method analysis.
#1667
Guomengze
closed
5 months ago
2
how to install OpenMP?
#1666
liamxg
closed
5 months ago
6
remove debug flags from production targets
#1665
stevenweaver
closed
8 months ago
0
2.5.56
#1664
stevenweaver
closed
8 months ago
0
new hyphy aBSREL (v_2.5.51) version changes default --kill-zero-lengths yes
#1663
ariadnamorales
closed
5 months ago
2
An error occurred in the web page running job
#1662
fengyujiusi
closed
8 months ago
2
Saturation and uneven tree topology (RELAX)
#1661
liamfriar
closed
5 months ago
3
Unable to run datamonkey services
#1660
andreaniml
closed
8 months ago
1
dN/dS scores from RELAX
#1659
liamfriar
closed
6 months ago
8
2.5.55
#1658
spond
closed
8 months ago
0
GC-biased gene conversion busted
#1657
Apis-DeLorian
closed
5 months ago
2
Problem running SLAC
#1656
rahmedbg
closed
8 months ago
4
aBSREL - understanding output
#1655
mlcossette9224
closed
6 months ago
5
File upload issue
#1654
cmariencheck
closed
9 months ago
8
how to specify threads used with hyphy gard
#1653
lagphase
closed
6 months ago
6
Problem with SLAC
#1652
js1604
closed
8 months ago
2
I have aproplem with SLAC
#1651
Zienabmosaad
closed
8 months ago
7
Cmake compiler error
#1650
joana-morais
closed
7 months ago
4
increased max number of GA rate classes from 5 to 18
#1649
hverdonk
closed
8 months ago
4
Hyphy installation problem
#1648
joana-morais
closed
9 months ago
2
Expected behaviour of multihit and synonymous rate variation in aBSREL
#1647
casparbein
closed
6 months ago
8
Inferring mutation rate from synonymous substitution rate in 4fold degenerate codons
#1646
Vizueta
closed
9 months ago
2
Understanding RELAX site proportions
#1645
NatJWalker-Hale
closed
9 months ago
4
Interpreting results of aBSREL for within & between species sequences
#1644
Emilyaoc
closed
7 months ago
2
stability of absrel results differs between versions
#1643
casparbein
closed
9 months ago
3
emscripten support
#1642
stevenweaver
closed
10 months ago
0
Internal ERROR when running aBSREL
#1641
Joye-YF-Zhou
closed
8 months ago
3
Error Displaying aBSREL results
#1640
Joye-YF-Zhou
closed
8 months ago
3
Interpret the results of the MEME model
#1639
WRran-Hydrogen
closed
8 months ago
4
Error:Failed to dereference
#1638
kfuku52
closed
10 months ago
3
How does hyphy deal with branch lengths?
#1637
siribi
closed
11 months ago
3
Problems installing HyPhy on Mac
#1636
daedhalus
closed
9 months ago
2
Effect of tree size on the power to detect diversifying selection at a single branch?
#1635
Suirotras
closed
11 months ago
2
openMP warning message: There was an error initializing an OpenFabrics device
#1634
Suirotras
closed
11 months ago
2
Choose Genetic Code
#1633
WRran-Hydrogen
closed
11 months ago
1
Hi! Im confused about some usages; How to test whether a branch species has been selected?
#1632
kuangzhuoran
closed
8 months ago
9
v2.5.52
#1631
spond
closed
11 months ago
0
HyPhy command line documentation
#1630
casparbein
closed
11 months ago
8
aBSREL - All branches analysed independently of labels
#1629
psorigue
closed
11 months ago
5
aBSREL: 100% positively selected sites with high omega values
#1628
Emilyaoc
closed
8 months ago
10
cmake configure failure with hyphy 2.5.51 on Debian sid
#1627
emollier
closed
10 months ago
5
What to go further after the analyses of General Descriptive model in RELAX
#1626
biozhajie
closed
8 months ago
5
Calculate branch-class specific omega
#1625
chenyangkang
closed
9 months ago
6
Regarding DATA Download
#1624
dipon199
closed
9 months ago
11
The --CPU flag is not helping with speed
#1623
bbitarello
closed
12 months ago
8
aBSREL excludes root branches from selection testing
#1622
casparbein
closed
1 year ago
2
error displaying FEL results
#1621
KVDlab
closed
9 months ago
3
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