issues
search
webyrd
/
mediKanren
Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.
MIT License
317
stars
53
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
fix curie-synonyms-raw: string=?: contract violation
#54
jeffhhk
closed
3 years ago
0
Renames part 1
#53
jeffhhk
closed
3 years ago
9
Unit tests for config-ref
#52
jeffhhk
closed
3 years ago
1
added visual tool to the shortest path algorithm
#51
kaiwenho
closed
3 years ago
0
add use-cases folder
#50
kimthi1011
closed
3 years ago
1
shortest path algorithm created
#49
kaiwenho
closed
3 years ago
0
fixed error in rank-regulators.rkt
#48
mzheng17
closed
3 years ago
0
renamed, cleaned up code, and documented rank-regulators.rkt and related files
#47
mzheng17
closed
3 years ago
1
Unsecret Agent not returning results for connections to UMLS identifiers for vomiting/nausea
#46
MarkDWilliams
closed
3 years ago
1
fixed inaccuracies in gene queries and updated drug queries
#45
mzheng17
closed
3 years ago
2
Chembl prefix being used
#44
MarkDWilliams
closed
3 years ago
2
adds rna-seq-test.rkt and gene-lists-for-rna-seq-test.rkt
#43
mzheng17
closed
3 years ago
0
adding graph-making files and vis files
#42
19katz
closed
3 years ago
1
adding new code for outputting graph as .dot file
#41
19katz
closed
3 years ago
0
adding map-making code from last time
#40
19katz
closed
3 years ago
0
moved trace-pathways-by-tissue-type.rkt to correct dir
#39
mzheng17
closed
3 years ago
0
renamed trace-pathways-mjp
#38
mzheng17
closed
3 years ago
0
modified trace-pathways-mjp.rkt
#37
mzheng17
closed
3 years ago
2
documented and added examples to pub-clustering.rkt
#36
mzheng17
closed
3 years ago
1
fixed inaccuracy in rank-side-effects.rkt
#35
mzheng17
closed
3 years ago
0
documented and debugged rank-drugs-related-to function and made it mo…
#34
mzheng17
closed
3 years ago
2
debugged 1st algorithm and made it into a function (count-downstream)
#33
mzheng17
closed
3 years ago
0
clustering concepts by publications from the covid19 dataset
#32
mzheng17
closed
3 years ago
0
Reorg readmes
#31
namin
closed
4 years ago
0
Adding Tutorial Only
#30
19katz
closed
4 years ago
1
add edges, though edgeprop fails to load for COVID19 dataset
#29
namin
closed
4 years ago
0
debugged rank function
#28
mzheng17
closed
4 years ago
1
Adding Lib-Kat and Tutorial
#27
19katz
closed
4 years ago
0
add query language design txt
#26
michaelballantyne
closed
4 years ago
0
Output not being flushed
#25
mihai-sysbio
opened
4 years ago
0
Improved concept search
#24
webyrd
opened
4 years ago
0
How to construct queries
#23
ShrutiMarwaha
opened
5 years ago
1
building index with rust
#22
pkpkpk
opened
5 years ago
0
License?
#21
cwebber
closed
6 years ago
1
contract violation, expected real
#20
biocyberman
opened
6 years ago
1
suggestion from Melissa Haendel: document licensing of KSs used
#19
saramsey
opened
6 years ago
0
Add metabolic databases
#18
mattmight
opened
6 years ago
0
Use GEO chipseq data to infer gene-gene regulatory relationships
#17
mattmight
opened
6 years ago
0
Add post-translational modifications as relations
#16
mattmight
opened
6 years ago
0
Add tissue-specific filter
#15
mattmight
opened
6 years ago
0
Support queries to find all proteins that interact with a given protein
#14
webyrd
opened
6 years ago
3
Support queries to find proteins with certain domains
#13
webyrd
opened
6 years ago
1
Generalize queries supported in current GUI
#12
webyrd
opened
6 years ago
0
Create web interface
#11
webyrd
opened
6 years ago
0
Add "entities like these" to mediKanren
#10
mattmight
opened
6 years ago
1
Integrate Orange Book Data
#9
gregr
opened
6 years ago
1
Import gene expression data sets and single gene up/down-regulation query
#8
mattmight
opened
6 years ago
0
Import wikidata
#7
mattmight
opened
6 years ago
1
Add "mechanisms in common" query
#6
mattmight
opened
6 years ago
0
Need a way to export results
#5
mattmight
opened
6 years ago
1
Previous
Next