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- [x] total loss of anatomical entity due to degeneration
- [x] abnormal motility of whole organism
- [x] decreased motility of whole organism
- [x] presence of edema [MP:edema](https://www.ebi.…
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## Major
- [x] #76
- [ ] Smarter external constructors for microbe and motility types
## Minor
- [x] #32
- [x] #14
- [x] #66
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We need to following patterns for XenBase:
increased mobility (PATO_0000051)
decreased mobility (PATO_0002283)
immobile (PATO_0000300)
Example:
cilium in the lung
Range probably cellular …
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Hi,
I am trying to install motility locally, however, there is an error with python module: it doesn't recognize the local path I send with the command "cmake" or "make install" (I tried both)
I…
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- [ ] IMPORTANT! Verify the default params for a New cell type match those in the C++ code
- [x] for rates|durations: after parsing rates in .xml, compute duration; and vice-versa
- [x] for rates|du…
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Need terms for presence and absence of flagella.
Annotating PMID: 4567134. The paper involves mutants with abolished cell motility, but still a presence of flagella (paralyzed), which needs to be no…
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## *Repository Creation Request* _Phase-2_
Use this to get your experiment repository created or updated on GitHub under Virtual Labs organization.
1. #### Coordinating Institute: Amrita Vishwa …
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This ticket is a placeholder for potential future work on cilia-related terms, if we ever get the chance/funding/collaborations to do so:
- [ ] We may want to look at other children of ‘cilium orga…
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Instead of defining a different `AbstractMicrobe` type for each model of chemotaxis, there could be a single `Microbe` type with a parameter `C
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We currently strip off single-word categories. However, about 600 of the files uploaded so far had no content categories at all, which is much harder to manage than the overcategorization that we have…