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Here's a rough draft of a db schema for G2P associations (in normal form). Currently, it only handles univariate associations.
- David Heckerman, Christoph Lippert, Chris Widmer
Study id (unique g…
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Dear DiffSegR developers,
Thank you for the very powerful package!
I was just wondering: is it possible to add more than a single locus to the loadData() step? Would it be possible to run the pac…
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Hi,
I am trying to set up a HAM from the latest OMA release (https://omabrowser.org/oma/current/) as in the tutorial here (https://zoo.cs.ucl.ac.uk/tutorials/tutorial_pyHam_get_started.html).
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Hello Shujun,
I am running the latest EDTA from the master branch 41cd64f and I am getting an error with 1 out of 3 of my genomes. I have looked and I would fine it hard to believe it is a weird en…
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Hi,
How to make this pipeline identify the duplicate gene modes of autotetraploid genome? Should I use haplotype-resolved genome or whole genome? Can you answer that for me? Thank you so much!
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Dear developer:
We are currently using MC to build the pan-genome with very good results, and now we want to extract non-reference sequences for subsequent analysis, I would like to ask what is the e…
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We use the same parameters to predict genes, of which there are two species have the same error when gene prediction
$more funannotate-predict.log
[11/30/21 18:36:19]: /opt/anaconda3/envs/funann…
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whole genome association analysis toolset
https://www.cog-genomics.org/plink2
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### Project title: Comparative analysis of camel mitochondrial genomes ###
#### The aims of this project are to: ####
- annotate the mitochondrial genome of Arabian camel
- the mitochondr…
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Hi, I'm trying to run cTWAS analysis for several locus. When running parameter estimation, I get normal parameter results in the first step of rough estimate.
```
2024-05-21 22:16:06 INFO::After i…