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### Is your feature related to a problem?
In one of my samples, wf-single-cell fails to correctly find the cutoff in the knee plot and returns an excessive large number of cells. Consequently, when l…
ddiez updated
1 month ago
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hi，scan-seq2 developer：
The single-cell third-generation transcriptome sequencing that you have developed is extremely exciting. When I replicate your data I have some doubts.
1、the code，My understa…
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The segment lengths as defined here:
https://github.com/BCCDC-PHL/FluViewer/blob/a71e39a0fd59c28644ee598ae4ceb986c0b913bb/fluviewer/fluviewer.py#L302-L311
...and here:
https://github.com/BCCD…
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I am running the following command:
snakemake --use-conda -p all
The log file of the error attached herewith.
[2019-08-27T144630.839988.snakemake.log](https://github.com/nanoporetech/pipeline…
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### Operating System
Other Linux (please specify below)
### Other Linux
rocky linux 8.9
### Workflow Version
v2.0.0-g52e3698
### Workflow Execution
Command line (Cluster)
### Other workflow ex…
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Hi,
I am hoping to perform transcriptome assembly using both nanopore long read sequencing data and illumina short read sequencing data. It appears RATTLE only permits the use of long read sequenci…
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Hi all,
We are sequencing minION flowcells using the ARTIC amplicons and beginning to test out the ARTIC workflow as described on this page:
[ARTIC SOP 2019](https://artic.network/ncov-2019/ncov…
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Hello!
I have been trying out NanoCLUST for 16S analysis of a few of my data and it has been wonderful so far.
But, a few datasets always abort during read_correction.
Even though I have 47 GB …
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
wf-basecalling v1.4.2-g9c0f9db
### Workflow Execution
Command line (Local)
### Other workflow execution
_N…
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If I have files output from AA and AC, is there a way for me to experiment with the cycle view /genome browser to investigate potential larger structures formed from my cycles/paths? Would be good if …