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Hi,
It will be great if the `--emit-summary` option for `dorado demux` also exists with `dorado basecaller`. With this new feature, it will be possible to perform basecalling, demultiplexing and cr…
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vezzi updated
9 years ago
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## Description
There could be a current bug where flowcells have issues assigning and de-assigning the status `ondisk` in statusdb. There have been several instances in production where analyses co…
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We have been getting data back as a giant fastq file of undetermined reads (instead of bcl) with the barcode in the read name. Most tools that demultiplex from fastq were very slow, could not be paral…
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The reading of data (from fastqs/barcode files, whatever) should be decoupled from the main unit of work (demultiplexing). Using the generator your wrote for FASTQs, write a method that accepts a fast…
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self explanatory
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**Comments**
This could be a new method in this plugin.
**References**
A user requested this support on the forum [here](https://forum.qiime2.org/t/qiime2-support-for-dual-indexing-with-heteroge…
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The traceback:
```
Error in py_call_impl(callable, call_args$unnamed, call_args$named) :
FileNotFoundError: [Errno 2] No such file or directory: '/home/rstudio/workspace//data/SspArc0008_10x_c…
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# Issue Report
No trim behaviour using Dorado Demux
## Please describe the issue:
Hi! I'm using dorado demux to demultiplexing my reads after using the kit SQK-NBD114-24 and after using dorado ba…
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### Description of feature
[fqtk](https://github.com/fulcrumgenomics/fqtk) is a rust re-write of [fgbio](https://github.com/fulcrumgenomics) DemuxFastqs tool.