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hi，I have a question
I run RepeatProteinMask and get the following two files .masked and .annot. Is there any way to get statistics like .tbl in the RepeatMasker result file?Can you help me, I will b…
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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**What do you want to know?**
I'd like to ask whether RepeatModeler could be used on Linux/MacOS ARM64 machines ?
I wanted to use it via the Docker image but it seems it is only for linux/amd64,…
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Hello,
An error occurs when I try to configure RepeatMasker 4.1.4 with Dfam 3.7 (h5) and RepbaseV20181026. My repeatmasker version is 4.1.4. I have updated famdb.py. I don't know why the error occurs…
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Hi @oushujun
Thanks for developing the panEDTA pipline. I have successfully executed the panEDTA.sh and obtained the final results. However, when I was counting novel TEs, I found that only a porti…
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Hello, I am trying to run velocyto via the CLI on files generated from 10x Cell Ranger cloud analysis platform. This outputs filtered/raw count matrices as .h5 files, genome-aligned BAM and BAM index …
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hi this is my bed file
and this is my bam file
![image](https://github.com/bvaldebenitom/Sol…
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I have run repeatmodeler succesfully but i didn't get this type of summary table.
this repeatmodeler table i got from gensas webtool repeatmodeler
can you guide me where i can find this table if i …
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Hi,
Thanks for developing EarlGrey, it is very well explained and I hope I can complete my analyses with it! Here is my problem:
I installed EarlGrey following the installation guide, step by st…
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Hello,
thank you for your amazing work! I am trying to run SComatic scripts using singularity container with all requirements installed. The SplitBamCellTypes.py worked just fine and created separa…