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When I try to use the ModuleTraitCorrelation function to Correlates categorical and numeric variables with Module Eigengenes or hub-gene scores, I get the following error:
Error in `stop_vctrs()`:
…
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Hi,
Thank you for creating Seurat-disk.
I am running in the following error:
obj
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Hello L_RNA_scaffolder users,
I am trying to use the program, but I can't manage to validate the input. I have my fasta file and my blat-generated psl (noHead) files. Perl, bioperl and C++ (gcc / c…
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Hi,
I am currently trying to run Taiji on a set of WT and KO RNAseq and ATACseq data. To not mess with previous analyses I decided to use the already existing gene quantification, which I did with …
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Hi all,
I'm in need of a species-level 16S database. I had relied on the rdp database on other analysis platforms (e.g. FROGS) but the pre-built kraken2 rdp database only goes to genus-level.
…
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GanttStart: 2023-04-20
### Background
In https://github.com/rasilab/github_demo/issues/3 and https://github.com/rasilab/rqc_aggregation_aging/issues/101, we identified and validated FK as a stalling…
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My command (with tombo 1.5) :
```
tombo resquiggle single_fast5/chrm1/ fasta/chrm1.fa --rna --processes 10 --num-most-common-errors 5 --overwrite --ignore-read-locks
```
the error :
```…
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Hello,
I am in a project of detection of modified bases in RNA and I am interested in using your software. In my case, the sequences have been performed with the latest version of nanopore, with th…
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blastdbcmd -entry_batch should begin with the sequence ID,when using accession as input will return wrong series.
For excample:
```
$ printf "%s %s %s \n" 1M5O_B -4-98 minus 30 | blastdbcmd -db $d…
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*Note:*
This task is too large for one ticket. Break this ticket up in to smaller tickets.
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Clone the current RNA NGS workflow chain (via YML file) for Toni's lab and adjust accordingly for…