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Hi,
I am trying some presumably accurate Nanopore reads that I have error-corrected (see https://gist.github.com/jelber2/f22c24442c34f872d8ebf073ad721476?permalink_comment_id=5058115#gistcomment-505…
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Hi,
Thank you for making this tool available to the community.
I have a VCF and an assembled genome for mouse long-read sequencing data. I would like to make a circos plot to visualize this. It…
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### Is your feature related to a problem?
The ability to identify copy number variants from matched tumour and normal (_i.e._ non-tumour) samples having undergone whole genome sequencing with ONT seq…
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Hi @jonassibbesen ,
Thanks for providing this great tool.
I am now trying to download the data bundle from the link you provide. However, it always failed after ~1GB data is downloaded no matte…
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One consequence of the recommended op-orders `CGQAW` and `GAWCQ` is that garbage reads may end up being trimmed to lengths of 0 or shorter than the provided window size in the `--overwrite-low-quality…
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I have multiple assemblies of hybrid and long-read sequencing. And its allowing me to run quickmerge on the output of quickmerge multiple times. I'm seeing increases in contig lengths and N50 but won…
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Hello everyone,
First of all, thank for reading me. I am a phd student in biology, and I am learning on my side some bio-informatics stuff, without any background.
Since several months, I have …
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Apparently, dorado v0.4 and newer versions have added a chimeric read splitting feature. However, it does not reach 100% sensitivity. I was wondering how is exactly the read splitting working. Assumin…
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As a TL I would to check the report consistency, identify and flag inconsistencies so that we can improve confidence in the report.
**Acceptance Criteria**
- [ ] Identify report rows where the m…