-
I found more number of ASV when using 2022.10.backbone.full-length.nb.qza file directly in QIIME2 for V3-V4 sequence taxonomy prediction in comparison to using 2022.10.backbone.full-length.fna.qza via…
-
**Bug Description**
ruuning ancombc on QIIME2-metagenomics-2024.5 on Linux.
Error: package or namespace load failed for ‘phyloseq’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load sha…
-
Hi everyone,
Can I use this workflow for tumor only variant calling to detect both Somatic and Germline variants? Or should I first run my data with Mutect in tumor only mode and then use varlocira…
-
I am creating a workflow that has many steps that use different tools, and I'm creating [minimal Docker images](https://github.com/Niema-Docker) for each of the tools. I was wondering which of the fol…
-
Hi,
unsure if this is a bug. but I believe some assembly step in medaka is taking abit longer than usual.
the readouts look like :
_"00:48:50 - Sampler] Took 0.00s to make features.
[00:49:08 …
-
Hi,
I am trying to run the pipeline but came across a problem. On the test data, it works as expected (using the conda profile). But on my actual data, it stops after the first step and does nothin…
-
Hi Saskia!
Hello from Canada!
I am using Decona to genotype some amplicon data and I have run into some trouble.
First, I was able to run the example data with no problem.
But, with, my …
-
Hi Dear Sir
Trust you are well
First I want to know any of the paper where I can found hiw to cute different packages used in microeco package for publications.
I mean how to cite for diversity, r…
-
### Ask away!
is there a schedule for making downstream workflows compatiable and up to date with the latest basecaller?
thanks
-
Hi Team,
Thanks for the nice work.
I was trying to reproduce some of the analysis of your paper, particularly on the visium dataset, but I am struggling a bit.
For now I have only tried one sli…