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AlexsLemonade
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refinebio
Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.
https://www.refine.bio/
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Dataset Request SRP103305
#3428
alexslemonade-bot
opened
8 months ago
0
Dataset Request SRP103305
#3427
alexslemonade-bot
opened
8 months ago
0
Dataset Request SRP103305
#3426
alexslemonade-bot
opened
8 months ago
0
Add Sample::developmental_stage field support
#3425
arkid15r
closed
8 months ago
0
Bump urllib3 from 1.26.14 to 1.26.18 in /foreman
#3424
dependabot[bot]
opened
8 months ago
0
Add STAGE to surveyor batch environment
#3423
arkid15r
closed
8 months ago
0
Fix deploy issues
#3422
arkid15r
closed
8 months ago
0
Sentry transport selection via DSN is deprecated
#3421
arkid15r
opened
8 months ago
0
Dataset Request SRP270925
#3420
alexslemonade-bot
opened
8 months ago
0
Explicitly remove existing API containers
#3419
arkid15r
closed
8 months ago
0
Update deprecated AWS elastic IP address configuration
#3418
arkid15r
closed
8 months ago
0
Dataset Request GSE134544
#3417
alexslemonade-bot
opened
8 months ago
0
Dataset Request GSE134544
#3416
alexslemonade-bot
opened
8 months ago
0
Rename Sample::genotype to Sample::genetic_information
#3415
arkid15r
closed
8 months ago
0
Update downloaders image: fix rvm.io keys issue
#3414
arkid15r
closed
8 months ago
0
Downloaders image won't build due to a GPG error
#3413
arkid15r
closed
8 months ago
1
Use STAGE variable for Sentry environment tag
#3412
arkid15r
closed
8 months ago
0
Standardize format_environment_variables input
#3411
arkid15r
opened
8 months ago
0
Staging deploy failed with TypeError
#3410
davidsmejia
closed
8 months ago
0
Fix SENTRY_DSN env name mismatch
#3409
arkid15r
closed
8 months ago
0
Change Sample property genotype to genetic_information
#3408
davidsmejia
closed
8 months ago
0
Update secrets configuration
#3407
arkid15r
closed
8 months ago
0
Secrets Manager Secret value not set on deploy
#3406
davidsmejia
closed
8 months ago
1
Questions about handling of submitter-processed Illumina BeadArrays
#3405
jaclyn-taroni
closed
7 months ago
1
Bump urllib3 from 1.26.14 to 1.26.17 in /foreman
#3404
dependabot[bot]
closed
8 months ago
1
Untrack infrastructure dev env file
#3403
arkid15r
closed
8 months ago
0
Run agilent tests after affymetrix image is ready
#3402
arkid15r
closed
8 months ago
0
Update scripts: set platform and system version
#3401
arkid15r
closed
8 months ago
0
Update GH workflows: add test_base to test_api_base dependencies
#3400
arkid15r
closed
9 months ago
0
Move smasher test jobs to larger runners
#3399
arkid15r
closed
9 months ago
0
Update docker files: use heredocs syntax
#3398
arkid15r
closed
9 months ago
0
survey transcriptome index strain mapping on assembly
#3397
davidsmejia
closed
9 months ago
1
Dataset Request GSE103542
#3396
alexslemonade-bot
opened
9 months ago
0
Dataset Request GSE74341
#3395
alexslemonade-bot
opened
9 months ago
0
Use unique worker's name for Sentry environment identification
#3394
arkid15r
opened
9 months ago
0
Format docker files RUN command
#3393
davidsmejia
closed
9 months ago
1
Possible docker cache layer conflicts
#3392
davidsmejia
opened
9 months ago
0
Use 1Password as a secrets storage
#3391
arkid15r
closed
9 months ago
0
Move github secrets to 1Password
#3390
davidsmejia
closed
8 months ago
1
Extend using of staging images cache
#3389
arkid15r
closed
9 months ago
0
Update common/foreman scripts
#3388
arkid15r
closed
9 months ago
0
Implement data request tracking
#3387
arkid15r
closed
9 months ago
0
check assembly when matching on organism strain mapping
#3386
davidsmejia
closed
9 months ago
1
Update post downloads summary job
#3385
arkid15r
closed
9 months ago
0
Update build status badge
#3384
arkid15r
closed
9 months ago
0
Update workers test data
#3383
arkid15r
closed
9 months ago
0
Weekly stats shows 0 downloads for some users
#3382
arkid15r
closed
9 months ago
0
EnsemblBacteria and EnsembleFungi species name is different... sometimes
#3381
davidsmejia
opened
9 months ago
1
Production Docker builds utilizing staging cache layers
#3380
arkid15r
closed
8 months ago
1
Fix failing smasher tests: Process completed with exit code 8
#3379
arkid15r
closed
9 months ago
0
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