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LinkageIO
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Camoco
Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.
MIT License
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Bump flask from 1.0.3 to 2.3.2
#102
dependabot[bot]
closed
1 year ago
0
Installation
#101
Sofi-tofi
opened
2 years ago
1
getting access to the co-expression network
#100
xtLiu2017
opened
3 years ago
0
module 'sqlalchemy.engine' has no attribute 'RowProxy'
#99
gsun2unl
opened
3 years ago
0
nthreads cannot be larger than environment variable "NUMEXPR_MAX_THREADS"
#98
XscapeCn
closed
3 years ago
7
Error: No such file or directory: 'pip'
#97
xtLiu2017
closed
3 years ago
1
Getting access to Camoco co-expression network in script
#96
mdanb
opened
4 years ago
0
error associated with installing camoco using python 3.7.4 on mac
#95
lisabang
closed
4 years ago
1
fix fstring on value error output
#94
rroutsong
closed
5 years ago
2
SNP2Gene mapping breakdown bug
#93
schae234
opened
5 years ago
1
Add degree distribution at varying z-score cutoffs to health command
#92
schae234
opened
5 years ago
0
Add network image to health command
#91
schae234
opened
5 years ago
0
ImportError: cannot import name Timestamp
#90
hriday535
closed
5 years ago
1
Camoco Installation Issue
#89
yenon118
closed
5 years ago
5
odo now breaks with the newest pandas due to tslib deprecation
#88
monprin
closed
5 years ago
11
How to export normalized data and genes belonging which network
#87
shenweima
closed
5 years ago
11
install ERROR
#86
congzhouczcz
closed
5 years ago
4
A better documentation
#85
hufnagelbarbara
closed
5 years ago
3
Make py.test know where the default files are
#84
schae234
closed
5 years ago
0
Does feature count method affect network structure?
#83
schae234
closed
5 years ago
1
SNP to gene mapping can sometimes mess up overlap when genes overlap.
#82
schae234
opened
6 years ago
0
Global degree does not change when changing significant edge value
#81
MeeshCompBio
opened
6 years ago
2
Deploy on Cyverse
#80
schae234
closed
6 years ago
2
Add syntax highlighting for GettingStarted.md
#79
RaoOfPhysics
closed
6 years ago
1
Add syntax highlighting for GettingStarted.md
#78
RaoOfPhysics
closed
6 years ago
5
Additional Roadmap Tasks
#77
schae234
closed
6 years ago
2
correct tiny typo :)
#76
annakrystalli
closed
6 years ago
1
GWAS.set_strongest causes ontology inconsitency
#75
monprin
closed
6 years ago
1
Database Lock Problem
#74
monprin
closed
6 years ago
1
Specified Networkx Version, Fixed Parallel Bug
#73
monprin
closed
6 years ago
4
Integrate Coveralls.io
#72
fuzzmz
closed
6 years ago
5
Installation working on MacOS
#71
seraco
closed
6 years ago
5
Add a coveralls badge to readme
#70
schae234
closed
6 years ago
4
Allow full installation using conda
#69
schae234
closed
6 years ago
16
Get TravisCI working for OSX
#68
schae234
closed
6 years ago
7
Migrate the install.sh script to work with setup.py
#67
schae234
closed
6 years ago
5
Gene name hyphens get filtered out when using cob.from_table()
#66
MeeshCompBio
opened
6 years ago
3
Installation Failed
#65
abbycabs
closed
6 years ago
3
Full documentation
#64
schae234
closed
5 years ago
0
Project Roadmap
#63
schae234
closed
5 years ago
2
Overlap Enhancement
#62
monprin
closed
6 years ago
0
Ontology enrichment overwrites itself
#61
schae234
closed
5 years ago
1
attrs for Term loci do not get stored when put into an Ontology
#60
schae234
closed
7 years ago
1
Overlap.py fix and linear model quick fix in COB.py
#59
MeeshCompBio
closed
6 years ago
4
cli overlap command fails
#58
MeeshCompBio
closed
6 years ago
0
Allow option for presence absence variation
#57
MeeshCompBio
closed
6 years ago
2
Two-tail GO, linkage fix, locality fix
#56
MeeshCompBio
closed
7 years ago
0
Implement Neighborhood Algorithm
#55
schae234
closed
7 years ago
2
Clustering the Expr matrix by leaves is broken
#54
schae234
closed
5 years ago
1
Your documentation is bad and you should feel bad.
#53
schae234
closed
5 years ago
1
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