ME-ICA mapca issues - Githubissues

ME-ICA / mapca

A Python implementation of the moving average principal components analysis methods from GIFT

GNU General Public License v2.0

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Updating style and python versions

#64 handwerkerd closed 9 months ago
6
Black and isort need to be rerun

#63 eurunuela closed 9 months ago
0
Fixed package publishing action

#62 eurunuela closed 1 year ago
0
Updated `pyproject.toml` and deleted files that are no longer necessary

#61 eurunuela closed 1 year ago
1
Update package installation and minimum Python version

#60 eurunuela closed 1 year ago
0
Change `n_features_` to `n_features_in_` for sklearn compatibility

#59 eurunuela closed 9 months ago
7
`n_features_` from sklearn's PCA is deprecated

#58 eurunuela closed 9 months ago
0
logging IID subsampling

#57 handwerkerd closed 1 year ago
3
Option to set IID subsample

#56 handwerkerd closed 1 year ago
11
Identified part of the issue with component misestimation

#55 handwerkerd opened 1 year ago
0
Remove DueCredit

#54 eurunuela closed 1 year ago
2
Remove DueCredit dependency

#53 eurunuela closed 1 year ago
0
python vs matlab

#52 leandrolecca opened 1 year ago
1
Document typical results for different datasets/acquisition parameters

#51 tsalo opened 2 years ago
1
Return variance explained for all components

#50 eurunuela closed 2 years ago
2
Compute PCA with all possible components then give solution with optimal number of selected criterion

#49 eurunuela closed 2 years ago
3
Make optimal number of components of all criteria accessible

#48 eurunuela closed 2 years ago
4
Made maPCA class accessible for other libraries

#47 eurunuela closed 2 years ago
0
Add readthedocs page for mapca

#46 eurunuela opened 2 years ago
2
Fix failing tests due to make command not being installed

#45 eurunuela closed 2 years ago
2
Tests fail due to make command not being installed

#44 eurunuela closed 2 years ago
0
Make criteria curves accessible as part of the mapca object

#43 eurunuela closed 2 years ago
2
Documentation missing

#42 eurunuela opened 2 years ago
4
Remove commented code

#41 tsalo opened 3 years ago
0
[INFRA] Add contributors to Zenodo file

#40 tsalo closed 3 years ago
0
Zenodo release

#39 tsalo closed 3 years ago
0
[FIX] Drop setuptools version requirement

#38 tsalo closed 3 years ago
0
[FIX] Minor changes to packaging files

#37 tsalo closed 3 years ago
0
[MAINT] Add GPL license

#36 tsalo closed 3 years ago
19
[REF] Use nilearn and images instead of arrays

#35 tsalo opened 3 years ago
1
Use nilearn's masking/unmasking functions internally

#34 tsalo opened 3 years ago
0
[FIX] Use new scaler to retain original unaltered scaler

#33 tsalo closed 3 years ago
1
[ENH] Use images in MovingAveragePCA instead of arrays

#32 tsalo closed 3 years ago
0
Operate on images in subsampling function

#31 tsalo opened 3 years ago
3
Scaler parameters overridden within MovingAveragePCA

#30 tsalo closed 3 years ago
2
Make class accept images instead of arrays

#29 tsalo closed 3 years ago
3
Add citation and link to GIFT

#28 eurunuela closed 3 years ago
1
Cite original maPCA paper and GIFT package

#27 eurunuela closed 3 years ago
0
[TST] Add integration test

#26 eurunuela closed 3 years ago
23
[FIX] Add dimensionality bug fix

#25 eurunuela closed 3 years ago
4
maPCA in tedana does not currently z-score data before performing PCA

#24 eurunuela closed 3 years ago
3
[REF] Replace parzen window function with one from scipy

#23 notZaki closed 3 years ago
5
[INFRA] Add deployment GitHub Action

#22 tsalo closed 3 years ago
4
[ENH] Replace kurtosis function with scipy one

#21 eurunuela closed 3 years ago
3
Allow utils._subsampling to accept ndarray

#20 notZaki closed 3 years ago
8
[TST] Add integration tests

#19 eurunuela closed 3 years ago
0
Skip parzen_win steps if sm_window is false

#18 notZaki closed 3 years ago
2
Replacing utils._kurtn with scipy.stats.kurtosis

#17 notZaki closed 3 years ago
5
[BUG] Dimensions of masked data not considered for fit_transform

#16 eurunuela closed 3 years ago
3
Use 3D fftconvolve instead of slice-wise 2D fftconvolve

#15 notZaki closed 3 years ago
3