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OpenTreeOfLife
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reference-taxonomy
Open Tree Reference Taxonomy (OTT) tools
BSD 2-Clause "Simplified" License
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fix link to file
#345
josephwb
closed
6 years ago
1
Suppression should be handled by flags, not by import filtering
#344
jar398
opened
7 years ago
0
Mauicetus (which is a whale) synonymized with Poromitra (which is a fish)
#343
bredelings
opened
7 years ago
1
ott1015551 used to map to Ximenia, but now it maps to Amyris, which is quite different
#342
bredelings
opened
7 years ago
0
Unify the two conflict methods
#341
jar398
opened
7 years ago
0
EOL page ids
#340
jar398
closed
6 years ago
0
A clutch of miscellaneous small improvements
#339
jar398
closed
7 years ago
0
Deal with issue #337, in part (3.1 build)
#338
jar398
closed
7 years ago
2
Developer feedback on OTT 3.1 build process
#337
kcranston
opened
7 years ago
2
Permit alignments with epithet + family matches
#336
jar398
opened
7 years ago
3
Maintenance manual
#335
jar398
closed
7 years ago
2
extra line break in our posted dump of worms
#334
mtholder
opened
7 years ago
1
Archiving improvements
#333
jar398
closed
7 years ago
3
use WoRMS for Mollusca
#332
kcranston
closed
7 years ago
0
Ericodes is a synonym of Erica (in plants)
#331
mtholder
opened
7 years ago
6
prioritize WoRMS over NCBI in Mollusca, maybe overall?
#330
kcranston
opened
7 years ago
0
misspelled name but the sources are spelled correctly
#329
mtholder
opened
7 years ago
0
it would be nice to show ranked list of taxonomy for each taxon
#328
mtholder
closed
7 years ago
2
Escherichia not in OTT
#327
mtholder
opened
7 years ago
7
new version of WoRMS
#326
kcranston
opened
7 years ago
0
Empty name field leads to error
#325
jar398
opened
7 years ago
0
Preserve GBIF 'doubtful' taxa when they have non-'doubtful' descendants
#324
jar398
opened
7 years ago
0
Url fix
#323
mtholder
closed
7 years ago
0
dryad package fixes
#322
kcranston
opened
7 years ago
0
Repair dryad deposit script
#321
jar398
closed
7 years ago
0
write the git SHA for the last amendment considered some where in the OTT release
#320
mtholder
opened
7 years ago
2
Get species fungorum list somehow and hide species names not in it
#319
jar398
opened
7 years ago
0
Use gnparse instead of regular expressions to convert GBIF scientificName column to canonicalName
#318
jar398
opened
7 years ago
0
Unicode problem - Ceramium tetricum var. ß pectinatum
#317
jar398
opened
7 years ago
3
Treat pro parte synonyms differently than other synonyms?
#316
jar398
opened
7 years ago
0
initial checkin of 3.0 release notes
#315
jar398
closed
7 years ago
0
[unassigned] in WoRMS
#314
jar398
opened
7 years ago
0
add figures to the HTML file
#313
jar398
closed
7 years ago
0
JAR's read-through
#312
jar398
closed
7 years ago
1
new_tip disappeared from merge_summary.json
#311
kcranston
closed
7 years ago
0
Fix same-division-weak and merge total stats
#310
jar398
closed
7 years ago
2
Update stats for draft6
#309
jar398
closed
7 years ago
0
Move taxonomy format and flags docs from wiki
#308
jar398
closed
7 years ago
0
Swap Proximity heuristic to fix #304; address OTT id problem found by @hyanwong
#307
jar398
closed
7 years ago
4
Punch list for method writeup
#306
jar398
closed
7 years ago
1
Rewrite backbone quality section (#297)
#305
jar398
closed
7 years ago
0
Handling of Diplonema in OTT3.0
#304
mtholder
closed
7 years ago
2
README and Makefile for data package
#303
jar398
closed
7 years ago
2
Move taxonomy format and flags documentation from wiki to repository
#302
jar398
opened
7 years ago
1
Dermocystidium salmonis belongs in Mesomycetozoea (Ichthyosporea) not Fungi
#301
mtholder
opened
7 years ago
0
Finalizing most of text
#300
kcranston
closed
7 years ago
0
Glaucophyta missing in ott 3.0
#299
mtholder
opened
7 years ago
1
OTTv3.0 draft 3 Acropora merged with Porina
#298
mtholder
opened
7 years ago
0
Backbone quality
#297
kcranston
closed
5 years ago
2
proposed fig4
#296
kcranston
closed
7 years ago
2
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