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StaPH-B
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:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
GNU General Public License v3.0
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adds checkm2
#1080
Kincekara
opened
2 days ago
0
adding krakentools version d4a2fbe
#1079
sage-wright
opened
1 week ago
0
adds checkv
#1078
Kincekara
closed
2 weeks ago
5
adds viridian 1.3.0
#1077
Kincekara
closed
2 weeks ago
2
adds bbtools 39.10
#1076
Kincekara
closed
2 weeks ago
4
adds elgato 1.20.0
#1075
Kincekara
closed
2 weeks ago
2
adds integron finder
#1074
Kincekara
closed
2 weeks ago
2
[Container Request]: dorado but without models included, maybe?
#1073
kapsakcj
opened
2 weeks ago
2
[Repo Request]: add citation to updated VADR model files for Flu
#1072
kapsakcj
opened
2 weeks ago
0
[Container Request]: integron_finder
#1071
kprus
closed
2 weeks ago
1
update tbprofiler to version 6.3.0
#1070
erinyoung
closed
2 weeks ago
1
adding ska2 version 0.3.10
#1069
erinyoung
closed
2 weeks ago
1
adding samtools version 1.21
#1068
erinyoung
closed
2 weeks ago
2
adding rasusa version 2.1.0
#1067
erinyoung
opened
3 weeks ago
0
updating for pycirclize version 1.7.1
#1066
erinyoung
closed
2 weeks ago
1
adding ppanggolin version 2.1.2
#1065
erinyoung
closed
2 weeks ago
2
adding pbptyper version 2.0.0
#1064
erinyoung
closed
2 weeks ago
1
adding datasets version 16.30.0
#1063
erinyoung
closed
2 weeks ago
1
adding multiqc version 1.25
#1062
erinyoung
closed
2 weeks ago
1
adding iqtree2 version 2.3.6
#1061
erinyoung
closed
2 weeks ago
1
updating htslib to 1.21
#1060
erinyoung
closed
2 weeks ago
2
adding bakta version 1.9.4 with light database
#1059
erinyoung
closed
2 weeks ago
1
adding flye version 2.9.5
#1058
erinyoung
opened
3 weeks ago
3
[Request An Update]: freebayes
#1057
erinyoung
opened
3 weeks ago
0
adding dnaapler version 0.8.1
#1056
erinyoung
closed
2 weeks ago
1
adding bcftools version 1.21
#1055
erinyoung
closed
2 weeks ago
2
updating augur to version 26.0.0
#1054
erinyoung
opened
3 weeks ago
0
Update medaka to version 2.0.0
#1053
erinyoung
closed
2 weeks ago
3
adds pangolin 4.3.1 with new pdata 1.30
#1052
kapsakcj
closed
3 weeks ago
3
Add Dorado 0.8.0
#1051
fraser-combe
closed
2 weeks ago
6
adds verkko v2.2
#1050
Kincekara
closed
4 weeks ago
1
adds sistr 1.1.2
#1049
Kincekara
opened
4 weeks ago
4
adds blast 2.16.0
#1048
Kincekara
closed
4 weeks ago
1
adds SeqFu
#1047
taylorpaisie
closed
2 weeks ago
5
[Request An Update]: Augur
#1046
erinyoung
opened
1 month ago
0
adds stxtyper 1.0.24
#1045
kapsakcj
closed
1 month ago
4
Add APHL Learning Center URL to documentation
#1044
erinyoung
closed
4 weeks ago
2
adding vigor4 version 4.1.20200702
#1043
erinyoung
closed
1 month ago
6
Pasty
#1042
Kincekara
closed
1 month ago
1
add shigapass 1.5.0
#1041
jvhagey
closed
1 month ago
5
RDP classifier
#1040
taylorpaisie
closed
1 month ago
9
add elgato 1.19.0
#1039
Kincekara
closed
1 month ago
2
add pasty 2.1.0
#1038
Kincekara
closed
1 month ago
5
add skani 0.2.2
#1037
Kincekara
closed
1 month ago
1
adding dnaapler version 0.8.0
#1036
erinyoung
closed
1 month ago
1
adding clair3 version 1.0.10
#1035
erinyoung
closed
1 month ago
1
adding bakta version 1.9.4
#1034
erinyoung
closed
1 month ago
1
adding aniclustermap 1.4.0
#1033
erinyoung
closed
1 month ago
5
update readmes for bcftools, htslib, and samtools
#1032
Kincekara
closed
1 month ago
2
[Request An Update]: vigor4
#1031
erinyoung
closed
1 month ago
0
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