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Vitek-Lab
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MSstats
R package - MSstats
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Setup CI/CD Pipeline for MSStats
#143
anshuman-raina
opened
1 week ago
2
docs(dataProcess+groupComparison): Add documentation on output tables of dataProcess and groupComparison
#142
tonywu1999
closed
1 week ago
2
ci(codium): Add codium agent to PRs for MSstats
#141
tonywu1999
closed
1 week ago
2
OpenMStoMSstatsFormat error
#140
daichengxin
closed
2 days ago
3
WIP: R Script to Process Benchmark Datasets with MSstats
#139
anshuman-raina
closed
1 month ago
0
Create GroupComparisonQCPlots
#138
anshuman-raina
closed
1 month ago
0
Added new MSStats end to end vignette
#137
anshuman-raina
closed
2 months ago
0
What is imputed when MBimpute = FALSE?
#136
luizalmeida93
opened
2 months ago
0
[Anshuman] Create GroupComparisonQCPlots
#135
tonywu1999
closed
4 weeks ago
2
[Anshuman] Create New MSstats Vignette
#134
tonywu1999
closed
4 weeks ago
0
WIP: Added New Vignette
#133
anshuman-raina
closed
2 months ago
0
fix(groupComparison): Fix .checkTechReplicate function to return true if any tech replicates exist
#132
tonywu1999
closed
2 months ago
0
check replicate still false
#131
YoujiaMa
closed
3 weeks ago
2
[WIP] Annotation validation function
#130
mstaniak
closed
3 weeks ago
3
added parameter validation to feature selection
#129
mstaniak
closed
3 weeks ago
0
merge imputation bug fix into release
#128
devonjkohler
closed
3 months ago
0
Feature imputation bug
#127
devonjkohler
closed
3 months ago
0
refactor(MSstatsSummarize): Create MSstatsSummarizeWithSingleCore to reduce memory and runtime usage
#126
tonywu1999
closed
3 months ago
8
feat(indra): fetch networks from indra cogex and visualize with cytoscape
#125
tonywu1999
closed
3 months ago
1
ci(dry-run): Set up dry run to use latest version of R and bioc + fix volcano plots
#124
tonywu1999
closed
5 months ago
0
docs(remove50Missing): Clarify documentation regarding remove50Missing parameter
#123
tonywu1999
closed
5 months ago
2
Issue with paired analysis
#122
luizalmeida93
closed
6 months ago
3
plotly for design sample
#121
deril2605
closed
6 months ago
1
docs(converters): Add log warning messages indicating that converters will be deprecated in favor of those in MSstatsConvert
#120
tonywu1999
closed
7 months ago
2
docs(news): Add news on parallel processing capabilities for release 3.19
#119
tonywu1999
closed
7 months ago
0
Omit peptides containing Cys
#118
patrick-willems
closed
7 months ago
2
docs(pull-request): Add pull request template and automatic dry run builds
#117
tonywu1999
closed
8 months ago
0
feat(dataProcess): Add parallel processing functionality to dataProcess
#116
tonywu1999
closed
7 months ago
3
modelBasedQCPlots missing protein name
#115
Radio-Controlled
opened
8 months ago
4
Return warnings and errors produced by dependencies
#114
mstaniak
opened
8 months ago
0
groupComparison() Issue in ComparisonResult Data Frame
#113
kkw5710
closed
8 months ago
20
Validation for experimental design
#112
mstaniak
closed
3 weeks ago
0
groupComparison() Issue in ComparisonResult Data Frame
#111
kkw5710
closed
8 months ago
8
feat(groupComparison): Enable parallel processing for groupComparison function
#110
tonywu1999
closed
8 months ago
6
feat(metamorpheus): Add converter from metamorpheus to core MSstats
#109
tonywu1999
closed
9 months ago
1
SDRF functions
#108
devonjkohler
closed
1 year ago
0
Adding Plotly feature to MSstats with Error Handling
#107
deril2605
closed
9 months ago
3
plotly functionality in dataprocessPlots
#106
deril2605
closed
1 year ago
1
Segfault error, "memory not mapped" when running dataProcess
#105
baptisteImbert
closed
8 months ago
3
Trouble imputing values with `dataProcess`
#104
lincoln-harris
closed
1 year ago
3
Fraction variable in PD annotation
#103
Tahyne
closed
1 year ago
1
BioReplicate in default Spectronaut output
#102
roberthardt
closed
8 months ago
3
Feature fragpipe converter
#101
devonjkohler
closed
1 year ago
1
Feature fragpipe converter
#100
devonjkohler
closed
1 year ago
0
problem with dataProcess()
#99
Yck711
closed
8 months ago
2
updated DIA-NN filtering and aggregation
#98
mstaniak
closed
1 year ago
0
potentially fix "attempt to apply non-function"
#97
jpfeuffer
closed
1 year ago
1
Could use a better error message when user requests a bad `featureSubset`
#96
bpolacco
closed
3 weeks ago
0
Question regarding pvalues vs. adj.pvalues
#95
liorlobel
closed
3 months ago
13
Importing DIANN in MSstats shiny
#94
NinaRadzey
closed
1 year ago
1
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