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abria
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TeraStitcher
A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images
http://abria.github.io/TeraStitcher/
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Stitching 3-channel 3d Tiffs
#50
PhilipRuthig
opened
5 years ago
4
Issue with ParaConverter (divide by 0)
#49
JeffreyStirman
closed
5 years ago
4
Can TeraStitcher stitch the randomly captured tiles from a C.elegans like creature?
#48
rmd13
opened
5 years ago
1
teraconverter: how to downsample at free ratio instead of 2^level-1
#47
rmd13
opened
5 years ago
2
No voxel dimension information available on the meta information of "TIFF (tiled, 3D)" image generated by TeraStitcher/TeraConverter
#46
rmd13
opened
5 years ago
3
stitching RGB images works better when source image was intensity inverted
#45
rmd13
opened
5 years ago
3
Loading ome tiff into terastitcher
#44
pawlowska
closed
5 years ago
10
Terastitcher 1.11 in Windows 10
#43
pawlowska
closed
5 years ago
1
Minor wiki issue: the paraconverter.pyc is missing form dropbox
#42
luofang34
opened
5 years ago
4
A wrong result from terastitcher
#41
fangchunyu
opened
5 years ago
4
wrongly stitched data although marked as 'stitchable' in xml
#40
pawlowska
opened
5 years ago
3
Stitching 4+ channels together
#39
pawlowac
opened
5 years ago
8
Issue with running demo
#38
pawlowac
opened
5 years ago
6
is voxel size option for Z step used at all?
#37
pawlowska
closed
5 years ago
2
Can't obtain test_middle_slice
#36
natsrm
closed
5 years ago
14
teraconverter - Option to set chunk size in HDF5
#35
jflat06
opened
5 years ago
4
Problem aligning 16-bit images
#34
soniaionescu
opened
5 years ago
5
HDF5Mngr exports data as H5T_NATIVE_CHAR instead of H5T_NATIVE_UCHAR
#33
jflat06
opened
5 years ago
0
Stitched images with obvious seams and
#32
Lalga
opened
6 years ago
4
Failed import tiff3D
#31
alecrimi
opened
6 years ago
4
Initial slices spread all over
#30
alecrimi
closed
6 years ago
5
installing terastitcher and getting 3D plugin to work
#29
danyalb
opened
6 years ago
3
convert an ims file with XYZCT dimensions to tiff files
#28
rmd13
opened
6 years ago
1
Added missing dependency (Linux build process was broken)
#27
FedericoMassaioli
closed
6 years ago
0
Removed spuriously committed autogenerated file from repo
#26
FedericoMassaioli
closed
6 years ago
1
Converting HDF5 Imaris file using TeraConverter
#25
katom16
opened
6 years ago
7
ERROR: Cannot find 3D I/O plugin "auto" or it is not a 3D I/O plugin
#24
ghost
closed
6 years ago
4
TeraStitcher can't see my TIF files even when using tiff2D or tiff3D I/O plugins
#23
Lalga
opened
6 years ago
2
Segmentation Fault when using Teraconverter to create bigtiff file
#22
mary-alegro
closed
6 years ago
4
Problem stitching 2D RGB images using the command line tools
#21
mary-alegro
opened
6 years ago
8
Merged data is not saved as a tiled image
#20
kirda
opened
6 years ago
5
Is 3D stitching available?
#19
iomega15
closed
6 years ago
6
Problem to merge ims files with Terastitcher v1.10.0
#18
tissota
closed
7 years ago
3
Teraconverter 1.10.2 crash on saving resolution 1
#17
matsojr22
closed
7 years ago
11
saving as TIFF 2D series fails in v1.10.0
#16
pawlowska
closed
5 years ago
6
Is there a way to align 2-ch images using one channel as an alignment map?
#15
puifais
opened
7 years ago
17
Saving merged images in a single file larger than 4GB
#14
pawlowska
opened
7 years ago
8
Help with organization of files and giving TeraSitcher the correct parameters
#13
puifais
closed
7 years ago
15
overlap region wrongly merged with the rest of data
#12
pawlowska
closed
5 years ago
7
Error message appears after merging: the reference system is not supported
#11
pawlowska
closed
5 years ago
7
FAQ: What parameter to set to change the directory location of processing files
#10
kannanuv
opened
7 years ago
10
ERROR: in StackStitcher::computeDisplacements(): incorrect subdata selection
#9
kannanuv
closed
7 years ago
3
Aligning step - OK to close and restart TeraStitcher?
#8
JimboMahoney
opened
7 years ago
7
Bad allocation?
#7
JimboMahoney
closed
7 years ago
10
Sparse data tiling
#6
miketaormina
opened
7 years ago
8
2D stitching also supported (experimental)
#5
redcrow
closed
7 years ago
9
Are there plans to release an OSX build?
#4
j6k4m8
closed
7 years ago
7
TeraStitcher cannot be compiled after HDF5 support was added
#3
abria
closed
8 years ago
1
Reduced intensity at tile boundaries
#2
oakdet
closed
8 years ago
14
Tiff issue in compile on MacOS10.9
#1
dgoodwin208
closed
9 years ago
3
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