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bihealth
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sodar-server
SODAR: System for Omics Data Access and Retrieval
https://github.com/bihealth/sodar-server
MIT License
14
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Add row link display override using assay comment
#1968
mikkonie
closed
6 days ago
1
Squash migrations for v1.0
#1967
mikkonie
opened
6 days ago
0
Cleanup StudyLinksAjaxView return data
#1966
mikkonie
closed
6 days ago
1
Handle StudyLinksAjaxView errors in Vue app
#1965
mikkonie
closed
6 days ago
1
Incorrect/invalid links in IGV setup documentation
#1964
mikkonie
opened
1 week ago
0
Display BAM/CRAM/VCF omit patterns in study shortcut modal
#1963
mikkonie
closed
6 days ago
1
Project list zone column displays zone icon with a NOT CREATED zone
#1962
mikkonie
closed
1 week ago
1
Add custom ISA-Tab template uploader app
#1961
mikkonie
opened
3 weeks ago
1
Hide ISA-Tab __output_dir field by user setting
#1960
mikkonie
closed
1 week ago
1
Upgrade dependencies for v1.0.0
#1959
mikkonie
opened
3 weeks ago
0
Uncaught exception in landing_zone_move with existing file sharing collection name
#1958
sellth
closed
3 weeks ago
3
Add row index to update_row()
#1957
mikkonie
closed
3 weeks ago
1
Add update_row() results in study table cache
#1956
mikkonie
opened
3 weeks ago
0
Python-irodsclient v2.x raises permission errors in BatchMoveDataObjectsTask
#1955
mikkonie
opened
4 weeks ago
4
Invalid assay measurement type in minimal ISA-Tab test files
#1954
mikkonie
closed
4 weeks ago
1
TaskflowAPI._raise_flow_exception() crash when setting longer status than allowed by model
#1953
mikkonie
closed
1 month ago
1
Review and optimize irodsbackend retrieval in study/assay pluginpoints/helpers
#1952
mikkonie
closed
4 weeks ago
1
Update project for OpenAPI compatibility
#1951
mikkonie
opened
1 month ago
0
Ensure study table caching works as expected for assay plugins
#1950
mikkonie
closed
1 month ago
1
Bootstrap tooltip issues in landing zone list view
#1949
mikkonie
closed
1 month ago
1
Allow modifying user membership if project is locked by taskflow
#1948
mikkonie
closed
1 month ago
2
Sanitize iRODS paths in get_row_path() calls
#1947
mikkonie
closed
1 month ago
1
Add generic assay plugin
#1946
sellth
opened
1 month ago
0
feat: Add generic assayapp featuring dynamic links
#1945
sellth
opened
1 month ago
1
Upgrade to python-irodsclient v2.0.x
#1944
mikkonie
closed
1 month ago
5
Task name repeated in taskflowbackend exception messages
#1943
mikkonie
closed
1 month ago
2
Increase CharField length for samplesheets models
#1942
mikkonie
opened
1 month ago
2
Add retrying for BatchCalculateChecksumTask exceptions
#1941
mikkonie
closed
1 month ago
1
Add logging for BatchCalculateChecksumTask exceptions
#1940
mikkonie
closed
3 months ago
1
Add opt-out settings for email notifications
#1939
mikkonie
opened
3 months ago
0
Fix README badge rendering
#1938
mikkonie
closed
3 months ago
1
Add support for multiple VCF files in germline IGV sessions
#1937
mikkonie
opened
3 months ago
0
Update REST API versioning for SODAR Core v1.0
#1936
mikkonie
opened
4 months ago
0
Grant contributors and guests read access to all landing zones within project
#1935
mikkonie
opened
4 months ago
0
Grant owners and delegates iRODS read/write access to contributor zones
#1934
mikkonie
opened
4 months ago
0
Cleanup and prepare v0.15.0
#1933
mikkonie
opened
4 months ago
0
IGV session merging opens a new session
#1932
mikkonie
opened
4 months ago
3
Add documentation for Cyberduck iRODS access
#1931
sellth
closed
4 months ago
1
Upgrade dependencies for v0.15.0
#1930
mikkonie
opened
4 months ago
0
Merge v0.14.2 release
#1929
mikkonie
closed
4 months ago
0
Source cell editing not working in assay table after row insert
#1928
mikkonie
closed
4 months ago
2
Render pooled/split rows on row insert in sheet editor
#1927
mikkonie
opened
4 months ago
0
Duplicate rows created on ISA-Tab export when splitting with unnamed data files
#1926
mikkonie
opened
4 months ago
1
IGV omit setting defaults not correctly set on project creation
#1925
mikkonie
closed
4 months ago
1
Rename get_igv_omit_override(), refactor use
#1924
mikkonie
closed
4 months ago
1
Add glob pattern and path support for SHEETS_IGV_OMIT_*
#1923
mikkonie
closed
4 months ago
1
Upgrade to django-sodar-core v1.0.0
#1922
mikkonie
opened
4 months ago
0
Handle missing family column in germline study cache update
#1921
mikkonie
closed
4 months ago
4
Add additional functionality to IGV omit patterns for VCF/BAM/CRAM files
#1920
mikkonie
closed
4 months ago
1
Add optional detailed landing zone taskflow output
#1919
mikkonie
opened
4 months ago
0
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