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brainglobe
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brainglobe-utils
Shared general purpose tools for the BrainGlobe project
MIT License
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[pre-commit.ci] pre-commit autoupdate
#103
pre-commit-ci[bot]
closed
2 weeks ago
1
Schedule tests to run weekly
#102
IgorTatarnikov
closed
1 month ago
1
Change cache path
#101
IgorTatarnikov
closed
1 month ago
1
[pre-commit.ci] pre-commit autoupdate
#100
pre-commit-ci[bot]
closed
1 month ago
1
Better testing coverage for dask reading of tadpole ome-tiffs
#99
alessandrofelder
opened
2 months ago
0
improve read_with_dask docs, ignore OME metadata
#98
alessandrofelder
closed
2 months ago
1
Conform to new linting rules
#97
IgorTatarnikov
closed
2 months ago
1
[pre-commit.ci] pre-commit autoupdate
#96
pre-commit-ci[bot]
closed
2 months ago
0
Export cells to brainrender from brainmapper widget
#95
adamltyson
closed
2 months ago
1
Add an "Export to brainrender" button to the `brainmapper` widget
#94
adamltyson
closed
2 months ago
0
handle nii.gz correctly
#93
alessandrofelder
closed
2 months ago
1
[Feature] make caching work as expected on CI
#92
alessandrofelder
closed
1 month ago
0
Update CI
#91
adamltyson
closed
2 months ago
1
DO NOT MERGE - testing CI
#90
adamltyson
closed
3 months ago
0
[BUG] `load_any` raises `NotImplementedError` for `.nii.gz` file
#89
alessandrofelder
closed
2 months ago
0
Add transform widget
#88
adamltyson
closed
2 months ago
1
Standardise contact information in readme
#87
adamltyson
closed
3 months ago
1
[pre-commit.ci] pre-commit autoupdate
#86
pre-commit-ci[bot]
closed
3 months ago
1
Numpy 2.0 compliance
#85
IgorTatarnikov
closed
4 months ago
1
Provide optional dependencies for qt instead of napari
#84
niksirbi
closed
4 months ago
1
Remove nrrd IO
#82
adamltyson
closed
4 months ago
1
Update supported python versions
#81
adamltyson
closed
4 months ago
3
[pre-commit.ci] pre-commit autoupdate
#80
pre-commit-ci[bot]
closed
4 months ago
1
[BUG] read_with_dask fails for folder containing .ome.tif files
#79
niksirbi
closed
2 months ago
0
Changed collapsed icon for CollapsibleWidget
#78
IgorTatarnikov
closed
5 months ago
1
[Feature] compare/replace cell matching code with `scipy.optimize` implementation
#77
alessandrofelder
closed
4 months ago
5
[Feature] Negative tests for cell matching
#76
alessandrofelder
opened
5 months ago
0
Be permissive about tiff axis metadata
#75
alessandrofelder
closed
5 months ago
1
Add cell matching support
#74
matham
closed
4 months ago
18
Add image IO loading code from cellfinder & create image IO submodule within IO
#73
adamltyson
closed
5 months ago
1
[pre-commit.ci] pre-commit autoupdate
#72
pre-commit-ci[bot]
closed
5 months ago
1
Run CI on both types of Mac
#71
alessandrofelder
closed
6 months ago
1
Expand header_widget to include doc path, citation and help text
#70
K-Meech
closed
6 months ago
3
Move `image_io` into `IO`?
#69
adamltyson
closed
5 months ago
0
Update Pathlib usage and docstrings
#68
willGraham01
closed
6 months ago
4
Support single z-stack tif file for input
#67
matham
closed
5 months ago
22
Convert remaining docstrings to numpydoc style
#66
K-Meech
closed
6 months ago
1
Add docstrings and expand tests for IO sub-module
#65
K-Meech
closed
6 months ago
3
Add tests for qtpy sub-module
#64
K-Meech
closed
6 months ago
1
Create tests for qtpy sub-module
#63
K-Meech
closed
6 months ago
0
[pre-commit.ci] pre-commit autoupdate
#62
pre-commit-ci[bot]
closed
6 months ago
1
Add tests for cells sub-module
#61
K-Meech
closed
7 months ago
2
[BUG] Cell < comparison
#60
K-Meech
closed
6 months ago
4
Refactor ImageIOLoadException
#59
K-Meech
closed
7 months ago
1
Use data path and fixtures consistently
#58
K-Meech
closed
7 months ago
2
Create tests for cells sub-module
#57
K-Meech
closed
7 months ago
0
[Feature] Add validation for numpydoc
#56
K-Meech
opened
7 months ago
0
Use codecov token in test_and_deploy
#55
K-Meech
closed
7 months ago
2
Handle str and pathlib.Path consistently in image_io
#54
K-Meech
closed
7 months ago
0
Convert general submodule docstrings to numpydoc
#53
K-Meech
closed
7 months ago
0
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