dotnetbio bio issues - Githubissues

dotnetbio / bio

Bioinformatics library for .NET

Apache License 2.0

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issues

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Burrows-Wheeler Aligner (BWA) implementation?

#43 jitterbox opened 2 years ago
0
Order & Orientation of Sequences matters for DeNovo Assembler

#42 robinemig opened 4 years ago
0
BamParser.Parse() returns null objects in rare instances

#41 RoboStephen opened 4 years ago
2
Speed bottleneck: Avoid re-parsing bam header when reading many intervals

#40 RoboStephen opened 4 years ago
4
Clustal Parser

#39 ryanfalzon opened 6 years ago
0
Add three letter abbreviations to ProteinAlphabet

#38 acesnik closed 6 years ago
3
Three-letter amino acid abbreviations

#37 acesnik opened 6 years ago
2
BAM Parser Performance Tweaks

#36 evolvedmicrobe closed 6 years ago
0
GFF version 3 crash

#35 acesnik opened 6 years ago
0
Mitochondrial genetic code variations

#34 acesnik opened 6 years ago
1
VCF parser

#33 acesnik opened 6 years ago
2
Suffix arrays for alignment

#32 acesnik opened 6 years ago
2
Fix Tests

#31 evolvedmicrobe closed 6 years ago
0
Update App Type

#30 evolvedmicrobe closed 6 years ago
0
propose - wrapper powershell module for bio.dll

#29 ghost opened 7 years ago
1
Sequence type parameter required

#28 TayyabaQamar opened 7 years ago
0
where is connection information

#27 TayyabaQamar closed 7 years ago
2
compile on Windows and run tests with NUnit3

#26 ghost closed 6 years ago
1
enable VS2015 with NUnit3 adapter to run the unit tests

#25 ghost closed 7 years ago
1
BoyerMoore Updated with example

#24 agento2 opened 7 years ago
5
Remove PCL Libraries

#23 evolvedmicrobe closed 7 years ago
0
The type initializer for 'Bio.Alphabets' threw an exception

#22 ambi1999 closed 7 years ago
2
.NET Bio flashback

#21 filicado closed 8 years ago
7
Fix QV Bug

#20 evolvedmicrobe closed 8 years ago
0
Allow Redundant Paths to Consider Indels

#19 evolvedmicrobe opened 8 years ago
0
Add diagnostic information for CCS reads

#18 evolvedmicrobe closed 8 years ago
0
FASTA parser doesn't support comments

#17 flipchart opened 8 years ago
3
Patch 1

#16 cpatmoore closed 8 years ago
5
Add LICENSE file

#15 flipchart closed 8 years ago
1
Validate Alignment Sequences Aren't Too Large

#14 evolvedmicrobe closed 8 years ago
0
Remove copy command

#13 evolvedmicrobe closed 8 years ago
1
Less Memory Usage / More Comments in NeedlemanWunschAligner

#12 evolvedmicrobe closed 8 years ago
1
Fix NeedlmanWunschAligner

#11 evolvedmicrobe closed 8 years ago
0
Cleanup the MUMmerAligner Class

#10 evolvedmicrobe closed 8 years ago
0
Fix indexing error in DNA sequence validation step.

#9 evolvedmicrobe closed 8 years ago
0
BAMParser Extensibility Enhancements

#8 KRBeut closed 3 years ago
8
Make the GenBank parser more robust to different indentations of the ORIGIN

#7 jjby closed 8 years ago
1
Issues with installing the BioTools

#6 residentx10 closed 8 years ago
1
Can't build with Mono Tarball

#5 evolvedmicrobe closed 7 years ago
2
Bio.Platform.Helpers.PlatformServices causes exceptions to be thrown on fresh build

#4 evolvedmicrobe closed 7 years ago
3
Case sensitivity still an issue with nuget packages

#3 evolvedmicrobe opened 8 years ago
1
Add Bio.Variant Namespace

#2 evolvedmicrobe closed 8 years ago
0
Add Parser For PacBio CCS BAM

#1 evolvedmicrobe closed 8 years ago
0