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genophenoenvo
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terraref-datasets
Repository for code and small datasets derived from the TERRA REF program
MIT License
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Season 4 drought treatment data
#87
rbartelme
closed
4 years ago
2
Implement Functional Programming paradigm for bnlearn ingestion script
#86
rbartelme
closed
4 years ago
4
Add drought treatment and blocking information to Season 4
#85
dlebauer
closed
4 years ago
7
Finish README in for-data-publication repo
#84
MagicMilly
closed
4 years ago
2
Share Soil Data Repo and finish README
#83
MagicMilly
closed
4 years ago
3
Curate methods on protocols.io
#82
MagicMilly
opened
4 years ago
1
Run GWAS to compare days to flowering between sites (mac, ksu, clemson)
#81
kshefchek
opened
4 years ago
0
Make vcf slim from knowledge graph generated genes of interest
#80
kshefchek
opened
4 years ago
0
Follow-up action items after collaborators review new data products
#79
MagicMilly
closed
4 years ago
1
Follow-up Action Items to Exploring NEON data
#78
MagicMilly
closed
4 years ago
8
Make phenotype data available with ontology terms as linked data using BrAPI
#77
MagicMilly
closed
4 years ago
5
Add available wind and humidity data to historical Clemson weather data
#76
MagicMilly
closed
4 years ago
3
Generate evolutionary distance for all genomic data
#75
kshefchek
closed
4 years ago
8
Become familiar with NEON / NPN data
#74
MagicMilly
closed
4 years ago
2
Transfer VCF of BAP Cultivars from all seasons to CyVerse Data Store
#73
rbartelme
closed
4 years ago
1
Add Clemson (Brenton 2016) sorghum cultivars to cultivar list
#72
MagicMilly
closed
4 years ago
1
Create new Cookie Cutter data science project
#71
MagicMilly
closed
4 years ago
4
Next Steps for Soil Data
#70
MagicMilly
closed
4 years ago
3
Decide how to reference germplasm and methods in README.txt
#69
MagicMilly
closed
4 years ago
2
Add methods and germplasm .csv files to machine-readable metadata
#68
MagicMilly
closed
4 years ago
2
Obtain and incorporate historical weather data from Clemson
#67
MagicMilly
closed
4 years ago
3
Missing Canopy Height Data Season 4
#66
rbartelme
closed
4 years ago
1
Update data cleaning R script for BBN (season4_bnprocess.R)
#65
rbartelme
closed
4 years ago
4
Include scripts for pulling data
#64
MagicMilly
closed
4 years ago
3
Include metadata for all derived data products
#63
MagicMilly
closed
4 years ago
4
Deposit Data in UA Libraries Data Repo
#62
MagicMilly
closed
3 years ago
2
Add data from Breton 2016 to BETYdb etc
#61
dlebauer
closed
4 years ago
3
Finish Data Repo Draft
#60
MagicMilly
closed
4 years ago
1
Add to cultivar list comparison across seasons and traits
#59
MagicMilly
closed
4 years ago
6
Continue working on gathering, producing, and organizing material for UA Data Repo
#58
MagicMilly
closed
4 years ago
3
prototype tall to wide script
#57
kshefchek
closed
4 years ago
1
Provide easily accessible updated, cleaned csv files with metadata
#56
MagicMilly
closed
4 years ago
1
Wide Format for Trait Data
#55
rbartelme
closed
4 years ago
2
Create list of all cultivars across MAC Seasons 4 and 6 & KSU Data
#54
MagicMilly
closed
4 years ago
2
Data Cleaning Notebooks
#53
MagicMilly
closed
4 years ago
1
Provide easy execution of data cleaning code
#52
MagicMilly
closed
4 years ago
5
Update .gitignore
#51
MagicMilly
closed
4 years ago
0
Added instructions for using CyVerse VICE apps
#50
MagicMilly
closed
4 years ago
2
Extract plot level clay, sand, and classification from soil data
#49
MagicMilly
closed
4 years ago
4
Continue working on action items for UA Data Repo early adopters
#48
MagicMilly
closed
4 years ago
3
Write script for pulling and cleaning data
#47
MagicMilly
closed
4 years ago
1
Convert plant trait ontology annotations to json file
#46
MagicMilly
closed
4 years ago
1
Follow up with Researchers on TO Annotations
#45
MagicMilly
closed
4 years ago
1
Curate cultivar data from Kansas Experiments
#44
MagicMilly
closed
4 years ago
3
Second iteration of Machine Learning training data
#42
MagicMilly
closed
3 years ago
1
Edit Rough Draft to Incorporate Comments from collaborators
#41
rbartelme
closed
4 years ago
0
Migrate Perspective Paper Word Doc to Google Docs
#40
rbartelme
closed
4 years ago
0
Fix Citations in Perspective Paper Rough Draft
#39
rbartelme
closed
4 years ago
1
Start working on action items for UA Data Repository
#38
MagicMilly
closed
4 years ago
2
Generate structured metadata using RMarkdown and EML and/or dataspice package
#37
MagicMilly
closed
4 years ago
2
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