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mourisl
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Rcorrector
Error correction for Illumina RNA-seq reads
GNU General Public License v3.0
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Rcorrector produces malformed corrected FASTQ file
#41
patrickaoude
closed
1 month ago
2
Feature Request: Argument for controlling where temporary files are written
#40
gladshire
closed
6 months ago
4
Encountering Failed at Stage 1 error
#39
ablanchette23
closed
9 months ago
2
-stdout only printing forward reads?
#38
gladshire
closed
1 year ago
3
Really correcting bases??
#37
rafaeltiveron
opened
1 year ago
2
Fix a potential buffer overflow error
#36
raymond-u
closed
2 years ago
1
Encountering 'Failed at Stage 3' Error
#35
aseyedia
closed
1 month ago
4
The -trim option
#34
StevenWingett
closed
2 years ago
2
(Also)Bad quality threshold is ','
#33
appleapplehan
closed
2 years ago
0
jellyfish error
#32
ghost
closed
3 years ago
3
No obvious reason why it failed at stage 3
#31
jychoilab
closed
3 years ago
7
Unknown argument: tmp_4f2df974fb738950aa484018d9409e8f.jf_dump
#30
chenyanniii
closed
3 years ago
3
Question about k-mer level threshold
#29
mtmcgowan
closed
3 years ago
3
If run on more than one thread, rcorrector hangs after doing its job (and sometimes before)
#28
margoleb
opened
3 years ago
1
Restart at stage 3
#27
joannarifkin
closed
3 years ago
5
rm: cannot remove file, no such file or directory--is this an error?
#26
peanut-buddy
closed
3 years ago
4
Update Jellyfish to version 2.3.0
#25
karolisr
closed
4 years ago
1
(Also) Fails at Stage 3
#24
jrede
closed
4 years ago
2
quits with a large file
#23
swollen
closed
3 years ago
0
more reads after correction?
#22
smallfishcui
closed
4 years ago
2
Running jellyfish2
#21
000generic
closed
4 years ago
2
make fatal error: no zlib.h
#20
e1992
closed
3 years ago
1
Rcorrector dropping reads? (again?)
#19
angelaparodymerino
opened
4 years ago
7
Rcorrector speed optimization
#18
sagnikbanerjee15
opened
4 years ago
3
No errors but no outputs?
#17
angelaparodymerino
closed
4 years ago
3
Feature request: print version information
#16
karolisr
closed
4 years ago
1
Feature request: Remove unfixable reads
#15
Shellfishgene
opened
5 years ago
4
Bad quality threshold is "("
#14
mdgn15
closed
5 years ago
6
Suggestion: not discard unpaired and unfixable in filter script
#13
sandbardev
closed
5 years ago
2
Rcorrector dropping reads?
#12
macmanes
closed
6 years ago
5
Correctly print out bad quality threshold (Closes: #10)
#11
moskalenko
opened
6 years ago
0
'Bad quality threshold is !'
#10
moskalenko
opened
6 years ago
1
Fails at stage 3
#9
StoltzfusJ
closed
6 years ago
7
unable to find/install prerequisite modules
#8
minor7b5
closed
6 years ago
4
Usage calls the binary 'a.out'
#7
tseemann
closed
8 years ago
1
Drop bundled jellyfish-2.1.3.tar.gz copy from GIT tree
#6
mmokrejs
closed
6 years ago
1
handle the -od option for the output directory
#5
cboursnell
closed
8 years ago
1
Set destination output directory
#4
cboursnell
closed
8 years ago
2
write corrected reads to stdout
#3
macmanes
closed
6 years ago
1
accept streaming interleaved reads
#2
macmanes
opened
8 years ago
1
cannot make
#1
macmanes
closed
9 years ago
2