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nipreps
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dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
https://www.nipreps.org/dmriprep
Apache License 2.0
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FIX: Change in _svgutils_ API (0.3.2) breaks our reportlet generation
#151
oesteban
closed
3 years ago
0
ENH: Add number of volumes per *b*-value to QC report
#150
josephmje
opened
3 years ago
8
DOC: Add FSL ``topup`` reference in citation boilerplate
#148
oesteban
closed
3 years ago
0
DOC: Revise *dMRIPrep*'s road-map
#147
oesteban
closed
3 years ago
1
FIX/MAINT: Drop Python 3.6 + Revise Python environment (versions pinned) in Dockerfile
#146
oesteban
closed
3 years ago
1
Broken numpy dependency for scikit-image installation
#145
oesteban
closed
3 years ago
0
ENH: Temporary integration of FSL eddy
#144
slimnsour
closed
3 years ago
18
DOC: change "functional" to "diffusion"
#143
josephmje
closed
3 years ago
1
FIX: Honor ``--nprocs`` flag
#142
oesteban
closed
3 years ago
0
FIX: Correctly check SDCFlows registry of ``IntendedFor`` files
#141
oesteban
closed
3 years ago
3
ENH: Connect fieldmap estimation to preprocessing pipeline of individual DWI runs
#140
josephmje
closed
3 years ago
7
Temporary integration of FSL eddy
#139
oesteban
closed
3 years ago
1
ENH: Refactor workflow for simplicity - explicit iteration over DWIs
#138
oesteban
closed
3 years ago
0
ENH: Run fieldmap estimation using *SDCFlows* 2.0
#137
oesteban
closed
3 years ago
1
MAINT: Move packaging tests from TravisCI to GitHub Actions
#135
oesteban
closed
3 years ago
0
MAINT: Move test data to a full-datalad settings
#134
oesteban
closed
3 years ago
0
updated edickie's affiliation
#133
edickie
closed
3 years ago
0
Roundup of denoising and unringing algorithms from ISMRM
#132
josephmje
opened
3 years ago
3
ENH: Use ``bbregister`` upstreamed to NiWorkflows, with sloppy mode
#131
oesteban
closed
3 years ago
0
STY/MAINT: Preparing the first large overhaul of dMRIPrep
#130
oesteban
closed
3 years ago
1
ENH: Add number of volumes per *b*-value to QC report
#129
josephmje
closed
3 years ago
3
Using `DiffusionGradientTable` on HCP-style acquisition
#128
josephmje
opened
3 years ago
3
DOC: Update readme and delete contributing guidelines in favour of nipreps website
#127
josephmje
closed
3 years ago
2
MAINT: Adding J. Veraart to the contributors list
#126
oesteban
closed
3 years ago
0
ENH: Port bbregister T1-to-dwi registration from fmriprep
#125
slimnsour
closed
3 years ago
6
DOC: Add base SVG file for the "figure1" (aka the workflow) flowchart
#124
oesteban
closed
3 years ago
3
REL: 0.3.0
#123
oesteban
closed
3 years ago
1
BrainHack Donostia 2020 / Tutorial
#122
oesteban
closed
3 years ago
1
Benchmarking preprocessing choices with validation data
#121
dPys
opened
3 years ago
0
Adds link to NH video.
#120
arokem
closed
3 years ago
3
Tutorial Proposal for ISBI (deadline: 09/25)
#119
oesteban
closed
3 years ago
12
Meeting 09/29 - Agenda
#118
oesteban
closed
3 years ago
1
Rotating oblique volumes and bvecs
#117
josephmje
opened
3 years ago
1
Revise Roadmap
#116
oesteban
closed
3 years ago
0
Port T1w-to-dwi registration from fMRIPrep (only bbregister)
#115
oesteban
closed
3 years ago
0
UserWarning: Casting data from int16 to float32
#114
levchenkoegor
opened
3 years ago
0
`n4_correct` from `early_b0ref_wf` fails on some subjects
#113
josephmje
opened
3 years ago
4
Link to Oscar's NeuroHackademy tutorial in the documentation
#112
arokem
closed
3 years ago
0
fieldmap-free distortion correction
#111
h-w-k
closed
3 years ago
4
ENH: Minor refactor reorganizing base workflows, in prep for #97
#110
oesteban
closed
4 years ago
2
ENH: Port the new *anatomical fast-track* from *fMRIPrep*
#109
oesteban
closed
4 years ago
2
ENH: Use new ``DerivativesDataSink`` from NiWorkflows 1.2.0
#108
oesteban
closed
4 years ago
3
ENH: Data-driven b0 identification tool
#107
oesteban
closed
4 years ago
7
MAINT: Remove the leftovers of AFQ in ``.afq/``
#106
oesteban
closed
4 years ago
3
MAINT: Refactor the workflow to use Nipype iterables
#105
oesteban
closed
4 years ago
3
Registration tools (arokem)
#104
arokem
opened
4 years ago
4
FIX: Revise vector tests broken when addressing other issues
#103
oesteban
closed
4 years ago
2
OHBM OSR
#102
arokem
closed
4 years ago
9
FIX: Minor refactor of DWI/brainmasks utilities and dtypes
#101
oesteban
closed
4 years ago
3
ENH: Do not raise error in all instances of b-vecs/vals inconsistencies
#100
oesteban
closed
4 years ago
4
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