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pepkit
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pipestat
Pipeline results reporting package
https://pep.databio.org/pipestat/
BSD 2-Clause "Simplified" License
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0.9.3 point release
#197
donaldcampbelljr
closed
1 month ago
0
Integrating Pipestat Summarize with PEPHub
#195
donaldcampbelljr
opened
1 month ago
0
v0.9.2 release
#194
donaldcampbelljr
closed
1 month ago
0
add sqlite option if included in config file
#193
donaldcampbelljr
opened
1 month ago
0
Support sqlite for db backend
#192
donaldcampbelljr
opened
1 month ago
0
Add pipestat summarize for PEPhub backend
#191
donaldcampbelljr
closed
5 days ago
2
Pipestat Summarize - stats not reported and objects have inaccurate paths
#190
donaldcampbelljr
opened
1 month ago
0
Schema validation requires `boolean` when reporting result. `bool` does not validate properly.
#189
donaldcampbelljr
opened
1 month ago
0
Extracting model creation code
#188
nsheff
opened
1 month ago
0
Add pephub backend to Pipestat
#187
donaldcampbelljr
opened
2 months ago
1
Add more output schemas to https://schema.databio.org/
#186
donaldcampbelljr
opened
2 months ago
0
update badges
#185
donaldcampbelljr
closed
2 months ago
0
Refactor reports.py
#184
donaldcampbelljr
opened
2 months ago
0
v0.9.1 release
#183
donaldcampbelljr
closed
2 months ago
0
Dev refactor reporting
#182
donaldcampbelljr
closed
2 months ago
0
Dependency check causes pytest failures when running individual tests.
#181
donaldcampbelljr
closed
2 months ago
4
fix #175
#180
donaldcampbelljr
closed
2 months ago
0
v0.9.0 Release
#179
donaldcampbelljr
closed
2 months ago
0
Create History for Filebackend and DB Backend
#178
donaldcampbelljr
closed
2 months ago
3
pipestat should offer the option to include a history of results
#177
donaldcampbelljr
closed
2 months ago
4
Rethink how pipestat returns reported results
#176
donaldcampbelljr
closed
2 months ago
2
Retrieve is not using the pipestatmanager object record_identifier if none is supplied
#175
donaldcampbelljr
closed
2 months ago
1
Should retrieve_one include items such as created and modified time, or only reported results?
#174
donaldcampbelljr
closed
2 months ago
1
Schema validation exception messaging
#173
khoroshevskyi
closed
2 months ago
3
Only show message about specific backend when created.
#172
donaldcampbelljr
closed
2 months ago
0
Error in retrieving one result in `retrieve_one`
#171
khoroshevskyi
closed
2 months ago
2
Check if required fields are checked if they actually required
#170
khoroshevskyi
closed
2 months ago
3
refactor `replace_JSON_refs` function
#169
khoroshevskyi
closed
2 months ago
1
Specify database schema using python objects instead yaml file
#168
khoroshevskyi
opened
4 months ago
1
move codecov to base coverage report
#167
khoroshevskyi
closed
2 months ago
5
Disable sqlmodel warning
#166
khoroshevskyi
opened
4 months ago
4
v0.8.2 release
#165
donaldcampbelljr
closed
4 months ago
1
Allow parameterizing via env vars
#164
nsheff
opened
4 months ago
2
Retrieving embedded values from object results
#163
nsheff
closed
2 months ago
2
Allow remote schemas. Fix #160
#162
nsheff
closed
3 months ago
5
Should force_overwrite default to true?
#161
nsheff
closed
2 months ago
3
Allow schema to be remote
#160
nsheff
closed
2 months ago
1
pipestat retrieval breaks with common prefix
#159
nsheff
closed
4 months ago
7
Pipestat interface suggestions
#158
nsheff
closed
2 months ago
5
No Schema Supplied should offer more information
#157
donaldcampbelljr
closed
4 months ago
1
What is multi_pipelines and when should it be used?
#156
nsheff
closed
2 months ago
2
multi pipelines error with only a single pipeline is confusing
#155
nsheff
closed
4 months ago
0
Fix quickstart example
#154
simeoncarstens
closed
4 months ago
0
Quickstart example does not work
#153
simeoncarstens
closed
4 months ago
1
v0.8.1 release
#152
donaldcampbelljr
closed
5 months ago
1
pipestat summarize: title of the html page is "Looper: None Summary"
#151
donaldcampbelljr
closed
5 months ago
0
pipestat summarize: project level items should not be placed in the same table as the sample level items
#150
donaldcampbelljr
closed
2 months ago
1
pipestat summarize: log files are not gathered when making a portable report
#149
donaldcampbelljr
closed
5 months ago
0
pipestat summarize: columns view should only show stats NOT objects
#148
donaldcampbelljr
closed
2 months ago
2
Adapt yacman v0.9.3
#147
nsheff
closed
5 months ago
2
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