richelbilderbeek razzo issues

richelbilderbeek / razzo

Research project by Giovanni Laudanno and Richel J.C. Bilderbeek

GNU General Public License v3.0

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issues

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Put correct nus in manuscript

#301 richelbilderbeek closed 5 years ago
5
Do run with new one-too-much nus

#300 richelbilderbeek closed 5 years ago
4
Check mutation rate

#299 richelbilderbeek closed 5 years ago
5
Do run with lower mutation rate [RUNNING]

#298 richelbilderbeek closed 5 years ago
6
Fix or fixed mbd function

#297 richelbilderbeek closed 5 years ago
1
Use new values for nu in manuscript and code

#296 richelbilderbeek closed 5 years ago
4
Pirouette: Fix high cyclomatic complexity

#295 richelbilderbeek closed 4 years ago
3
Run: one Giappo param setting with range of NS epsilons

#294 richelbilderbeek closed 4 years ago
5
Develop

#293 Giappo closed 5 years ago
0
Determine optimal crown age

#292 richelbilderbeek closed 5 years ago
8
Update pirouette figure

#291 richelbilderbeek closed 5 years ago
11
Add 'f_mb_species' in collect_n_mb_species

#290 richelbilderbeek closed 5 years ago
1
Create file from number of multiple-born species

#289 richelbilderbeek closed 5 years ago
1
Add 'update_razzo'

#288 richelbilderbeek closed 5 years ago
1
Show DNA sequence length in overview

#287 richelbilderbeek closed 5 years ago
0
create_fig_esses.R must produce results in local folder

#286 richelbilderbeek closed 5 years ago
0
Correct for bug in number of particles

#285 richelbilderbeek closed 5 years ago
2
Develop

#284 Giappo closed 5 years ago
0
Do a run with 10 Nested Sampling particles

#283 richelbilderbeek closed 5 years ago
5
Develop

#282 Giappo closed 5 years ago
0
Develop

#281 Giappo closed 5 years ago
0
Fix mcbette bug

#280 richelbilderbeek closed 5 years ago
1
Show number of multiple-birth events

#279 richelbilderbeek closed 5 years ago
5
Create trees with 80-100 tips mean/median

#278 richelbilderbeek closed 5 years ago
8
Show best models

#277 richelbilderbeek opened 5 years ago
0
Create fig 1: separate generative from best

#276 richelbilderbeek closed 5 years ago
11
Show percentage ESS < 200

#275 richelbilderbeek closed 5 years ago
1
Can run with more particles?

#274 richelbilderbeek closed 5 years ago
4
Do run with 10 particles

#273 richelbilderbeek closed 5 years ago
3
Are results results?

#272 richelbilderbeek closed 5 years ago
2
Do a run with crown age is 7 for 3 candidates

#271 richelbilderbeek closed 5 years ago
6
Check twinning params seeds are all unique

#270 richelbilderbeek closed 4 years ago
1
Show mean ESS in run-times

#269 richelbilderbeek closed 5 years ago
1
Show mean n_taxa in run-times

#268 richelbilderbeek closed 5 years ago
0
Show n_replicates in showing sim run-time

#267 richelbilderbeek closed 5 years ago
1
Show ESSes of a date in figure

#266 richelbilderbeek closed 5 years ago
3
Show mean and median of ESS of run

#265 richelbilderbeek closed 5 years ago
2
Show MCMC chain length in showing sim run-time

#264 richelbilderbeek closed 5 years ago
2
Check crown ages match

#263 richelbilderbeek closed 5 years ago
1
Write 'collect_run_times'

#262 richelbilderbeek closed 5 years ago
9
Which candidate models?

#261 richelbilderbeek closed 5 years ago
1
Analyse: number of taxa enough to publish?

#260 richelbilderbeek closed 5 years ago
7
Figure shows multiple medians

#259 richelbilderbeek closed 5 years ago
2
What causes a low ESS when comparing all models?

#258 richelbilderbeek closed 5 years ago
2
Develop

#257 Giappo closed 5 years ago
0
Develop

#256 Giappo closed 5 years ago
0
Write 'create_mbd_params_file'

#255 richelbilderbeek closed 5 years ago
4
Figure 1 uses the 4 pretty colors

#254 richelbilderbeek closed 5 years ago
15
Remove obsolete values in 'collect_' functions

#253 richelbilderbeek closed 5 years ago
1
Merge pull request #250 from richelbilderbeek/giovanni

#252 Giappo closed 5 years ago
0

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