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wikipathways
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cytoscape-wikipathways-app
WikiPathways app for Cytoscape to open and access pathways from WikiPathways
Apache License 2.0
5
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empty node table and missing names in edge table
#84
AlexanderPico
closed
5 years ago
2
can't open GPML files from file system
#83
AdamStuart
closed
4 years ago
9
Check out new addAnnotations() method via Mike
#82
AlexanderPico
closed
5 years ago
0
Is it correct to remove self loops?
#81
AdamStuart
closed
5 years ago
1
All annotations are shifted up a bit
#80
AlexanderPico
closed
6 years ago
2
brackets filled with black by default
#79
AlexanderPico
closed
6 years ago
1
after running RCy3 Vignette, import pathway shows anchors styled
#78
AdamStuart
closed
6 years ago
1
Cytoscape crashes when zooming all the way out on a pathway
#77
khanspers
closed
5 years ago
0
Shape rotation problems
#76
AlexanderPico
closed
5 years ago
2
Cell shapes disappear after reopening session
#75
khanspers
closed
6 years ago
2
ID Mapping error
#74
AlexanderPico
closed
6 years ago
3
Pathway with lots of elbows fails to load properly
#73
AlexanderPico
closed
6 years ago
2
Issue with Edge Bend Style
#72
AlexanderPico
closed
6 years ago
2
WikiPathways-As-Network
#71
AlexanderPico
closed
6 years ago
1
Node border width mapping not working
#70
khanspers
closed
6 years ago
2
Don't overwrite WikiPathways style when opening pathways, if it already exists
#69
khanspers
closed
6 years ago
1
Opening more than one pathway programmatically (via commands) throws errors
#68
AlexanderPico
closed
6 years ago
3
Style for networks imported "as-network"
#67
AlexanderPico
closed
5 years ago
2
Attributes missing following import-as-network
#66
AlexanderPico
closed
6 years ago
0
Cellular comparments are not saved/restored
#65
AlexanderPico
closed
6 years ago
4
Lines are bent via non-persistent bypass
#64
AlexanderPico
closed
6 years ago
2
Preview doesn't show anything
#63
AlexanderPico
closed
6 years ago
3
Add import-as-network command
#62
AlexanderPico
closed
5 years ago
2
Update to https
#61
AlexanderPico
closed
6 years ago
0
OpenLinkedPathwayAsNewTask is broken
#60
AlexanderPico
closed
6 years ago
1
Push and point us to the latest branch of development
#59
AlexanderPico
closed
6 years ago
1
Scaling of shapes is off
#58
AlexanderPico
closed
6 years ago
1
Scale a cell boundary, the spacing between lines does not scale correctly
#57
AlexanderPico
opened
6 years ago
4
Error when opening pathway
#56
khanspers
closed
6 years ago
3
Some group styles are not visualized correctly
#55
khanspers
closed
6 years ago
5
Suggestion: Increase space between mim-inhibition and object
#54
khanspers
closed
6 years ago
1
Feature request: Add species name after pathway title in Network list
#53
khanspers
closed
6 years ago
1
Add WPID into Network Table attribute
#52
AlexanderPico
closed
6 years ago
1
Additional anchor point specified for 2+ turns on elbow and curve
#51
AlexanderPico
opened
6 years ago
1
Bad feedback on empty search results
#50
AdamStuart
closed
6 years ago
3
Pathway fails to load
#49
AlexanderPico
closed
6 years ago
3
Rotation
#48
AdamStuart
closed
6 years ago
6
Missing arrowheads
#47
AlexanderPico
closed
6 years ago
2
Phosphorylations and other states
#46
AlexanderPico
closed
6 years ago
1
Status of commands?
#45
AlexanderPico
closed
6 years ago
10
Shapes as annotations
#44
AlexanderPico
closed
6 years ago
5
Save fails after loading pathway
#43
AlexanderPico
closed
6 years ago
1
split edge paths
#42
AlexanderPico
closed
6 years ago
6
version confusion
#41
AlexanderPico
closed
6 years ago
2
edge paths
#40
AlexanderPico
closed
6 years ago
2
The cellular compartment should be an annotation, not a node
#39
AlexanderPico
closed
6 years ago
1
circle arrowheads drawn too thick
#38
AlexanderPico
closed
6 years ago
4
Initial search bar usage loads broken import dialog
#37
AlexanderPico
closed
6 years ago
0
Support for AND searches
#36
AlexanderPico
closed
6 years ago
4
Sortable results table
#35
AlexanderPico
closed
6 years ago
1
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