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Hi,
I was hoping I could ask for a bit of more detail on how Regenie processes quantitative phenotypes. I am currently considering if I should do the process myself, or use Regenie's implementation…
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https://www.biorxiv.org/content/early/2018/03/03/275628
> The diagnosis of multidrug resistant and extensively drug resistant tuberculosis is a global health priority. Whole genome sequencing of cl…
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I want to run rg with two GWAS summary statistics, both derived from Finngen. Should I make some additional restrictions to correct sample overlap?
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Genome-wide phenotypic analysis of growth, cell morphogenesis and cell cycle events in Escherichia coli (2018) Manuel Campos, Sander K. Govers, Irnov Irnov, Genevieve S. Dobihal, François Cornet,
and…
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Within the function `prep_group_analysis_workflow` in `cpac_group_analysis_pipeline.py`, if scrubbing is turned on then various motion parameters are added to the phenotypic file. This seems redundant…
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It would be great if for each variant we were able to show the genomic alteration type, such as CNV, SNP, etc.
Others have also asked for phenotypic consequences, such as recessive, dominant, etc. a…
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**Situation:** Allogenic (but not xenogenic) bone-marrow chimeras are not unusual, both in research as well as in clinical settings (e.g., BM transplant as treatment for hematologic disorders).
**P…
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I created a field trial with the cross stock type using the field design walk-through. I was able to upload data to the trial and I can see the uploaded data in the phenotype summary table on the tria…
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Spun off of #286 and https://github.com/NCATSTranslator/reasoner-validator/issues/88#issuecomment-1633139389
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@kimrutherford @ValWood
The full list of constrains is in this issue: https://github.com/pombase/canto/issues/2593
Related to #2613
## Affecting GIs as defined by BioGRID right now
Phenot…