-
Hi,
I recently saw a graph in a paper that looked like a KaryploteR image where the authors added something to all the chromosome ends that had telomeres to show how complete their sequence was. I wa…
-
* **Term to be merged: Provide GO ID and term label**
protection from non-homologous end joining at telomere GO:0031848
* **Which term do you propose this term merge into? Provide GO ID and term…
-
* Banner background should be the same as Projects banner
* Fix wrap around text on the following paragraph
* What will it involve (time, team, activity set)
* Johns Hopkins Pathology is the only h…
-
Hallo,
I have a WGS sample generated from an oral mucosa swap, sequenced with high coverage (150x) and mapped against GRCh38. Running telomerecat I get very low read values and a very low telomere …
-
Hi Mikhail,
Could we extract centromere or telomere clusters and calculate their compartment strength using panted?
Best,
Pengfei
-
In the review article "Genome assembly in the telomere-to-telomere era", @lh3 and @richarddurbin have mentioned that:
> When constructing an overlap graph, we discard a read contained in longer rea…
-
Thank you for adding the telo command, it is much faster than the grep_telomere script I had put together.
I was hoping to use this with a wasp assembly to see its telomeres. As this pub mentions h…
-
Hi,
I am wondering is there any way (not the manual checking) to extend the contigs according to the telomere overhangs identified?
Thx
-
Hello,
I'm super excited to test this tool out. I'm currently testing it out with the LongRanger output and the 10X-specific TitanCNA workflow. I keep getting this error message when one of the SVs…
-
We aim to create the `.mu` and `.UD` resource files, which are auxiliary files for the SVDPrefix, using the CHM13 variant call format files (VCFs) available at [this link](https://s3-us-west-2.amazona…