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This is the code they used in `CAMI II`
```
metaquast -r /path/to/set0-9/ref-genomes \
-t 24 --unique-mapping --no-icarus -o /path/to/output_dir \
-l megahit-103-df,megahit-113-df,megahit…
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Hello
I uploaded my fasta and metadata.txt files into the online pipeline v 2.2
The process completed in one second, i am not able to download my data when i press the button download, nothing happe…
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For orientation: the genome feature class corresponds to the main entry in a…
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Hi!
I have used the code below to analyze my metagenomic data:
`lefse
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[Suggestion to add amplicon resequencing data-processing functionality, brief description of new scripts to aid in this, and request for guidance on unit testing or code review]
---
## Justification …
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Hello,
I'm Sebastian, working on my MSc thesis, aiming to create a knowledge graph of the wastewater treatment microbiome. We're using Netcomi for constructing Microbial Association Networks (MANs)…
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```
metawrap quant_bins -b /share/home/binhaow/metagenomedata3/BIN_REFINEMENT3/metawrap_60_10_bins/ -t 20 -o /share/home/binhaow/metagenomedata4/QUANT_BINS3 -a /share/home/binhaow/metagenomedata3/ASS…
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# Feature requests
**Purpose:** this is a place to easily log suggestions/feature requests. E.g:
* "I want to display XXX output as an option!"
* "I want to be able to combine database sketches…
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I suggest deleting the Limitations box. Because 16S is highly conserved, EMIRGE is pretty good at recovering novel sequences.
Also there are other options for taxa identification available that ta…
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v2.10.1-g4c2c583
### Workflow Execution
EPI2ME Desktop (Local)
### Other workflow execution…