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Need to implement a list init api which takes a table id as input and returns list of columns supported by the table.
The response needs to contain id, name, classification/category.
**Would lik…
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-searching for indexed reference genome to decrease computational resources needed for indexing
- links :
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/405/GCA_000001405.15_GRCh38/seqs_for_a…
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The program runs some steps, then an error occurs.
after relabling, there are 140259 eq classes
Building the k-mer equiv. class transcript mappings
0% [> …
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Hi,
after some issues with Archaea reconstructions not predicting methanogenesis we tried to debug with the example provided in the docs. The exact assembly used in the example has been removed fro…
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Create BCOs for all new datasets
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Hello,
I want to install glimmer-mg but I don't know where I'm suppposed to indicate the path to the Refseq library I already have on my server?
Thank you
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Hi,
When I run:
`download_genomes.sh "Methanosarcina"`
It gives me:
`find: refseq/bacteria: No such file or directory`
Any tips on downloading from an archaeal genus?
Many thanks!
Gao…
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Biopython/enterz.efetch issue with certain accession listed. Seems to effect all compete refseq accessions and some shotgun sequenced Refseq accessions.
List of effected accessions:
NC_008268
NC_012…
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**Description:** Dear Developer Team, thank you for developing Metabuli, it has worked great with my test datasets! I recently tested the Metabuli app on ONT long reads against the virus database and …
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See https://github.com/draeger-lab/ModelPolisher/issues/106 for more details.