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Hi All,
I'm not sure that here is the right place to ask my questions, but hopefully one of you could advise me. I'm dealing of assembly of a diploid plant genome with estimated genome size of ~9Gb…
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The version 0f8190d7e51ef0faece835ec629811713ba224c0 cannot be compiled on linux fedora due to these following errors
```
Compiling statrs v0.16.1
Compiling bio v1.6.0
Compiling genome-gr…
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Hello developers,
Thank you for developing a nice benchmarking tool. How to generate reference genomes in json format for BinBencher assessment? I couldn't understand from the documentation…
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Hi Developer,
Thank you for developing this good tool.
Is it possible to use purge_dups to get the best set of contigs from two different assembler?
For example, I got draft genomes of the same org…
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We tried running the SOAPdenovo_array.sh script using 30 .fq files of total size 557GB as input and a reference genome with a total size of approximately 17GB.
The SOAPdenovo_array.sh script requires…
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### Description of bug
Hi everyone,
I encountered an error while using SPAdes-3.15.5 to assemble a diploid genome (~560 Mb) with 0.67% heterozygosity. About 124 GB of corrected reads were provideed…
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### Description of bug
Hi, I'm getting this error (SPAdes genome assembler v3.15.5)
…
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Hi there,
We are using hifi-asm to assemble human genome sequenced on Pacbio Revio machine, the coverage of the sample is roughly 30X (may be lower though), we found that hifi-asm might miss one ha…
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Hello,
I am trying to run the AAFTF pipeline to assemble several Pleurotus genomes (testing it on 1 genome only) and I thought to run it as a pipeline at first. I am getting this error below. Spad…
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Details:
http://permalink.gmane.org/gmane.science.biology.ray-genome-assembler/735