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EBIvariation
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vcf-validator
Validation suite for Variant Call Format (VCF) files, implemented using C++11
Apache License 2.0
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Incorrect header lines in v4.3/passed/complexfile_passed_000.vcf and *_meta_pedigreedb.vcf
#250
daviesrob
opened
1 week ago
0
GA4GHTT-270: changes for CNV:TR and optional leading phasing info
#249
vasudeva8
opened
1 week ago
0
EVA-3586 - Allow colon in chromosome names
#248
tcezard
opened
1 week ago
0
update to generate mac arm binary
#247
vasudeva8
closed
1 week ago
0
GA4GHTT-261 - changes for CN, SVLEN, SVCLAIM
#246
vasudeva8
closed
1 week ago
1
getting an error trying to execute on macosx
#245
romk1n
opened
1 month ago
6
GA4GHTT-261 - Add Test files for STR and new phasing notation
#244
tcezard
closed
1 week ago
0
Add Test cases for STR and phased genotypes
#243
tcezard
closed
1 month ago
0
GA4GHTT-261 - 44 1
#242
vasudeva8
closed
1 week ago
1
EVA-3281 - Allow synonyms to be the same value if they are on the same line
#241
tcezard
closed
1 month ago
0
GA4GHTT-232 - vcf4.4 initial changes
#240
vasudeva8
closed
3 months ago
0
Add description of conda installation
#239
tcezard
closed
3 months ago
0
Add sentence to clarify the installation path
#238
tcezard
closed
4 months ago
0
GA4GHTT-226 - updates for Mac build - 2
#237
vasudeva8
closed
4 months ago
0
v0.9.5 Linux binaries display version 0.9.4 with '-v' option
#236
gg78uol
closed
4 months ago
1
Add VCF 4.4 test files for SVCLAIM
#235
tcezard
closed
3 months ago
0
SVLEN is expected to be negative for DELs
#234
damianosmel
closed
4 months ago
1
fix for build failure due to minmac version
#233
vasudeva8
closed
4 months ago
0
vcf-validator allows negative value in QUAL column
#232
opplatek
closed
4 months ago
1
Test failure
#231
vasudeva8
closed
5 months ago
0
mac build issue resolution
#230
vasudeva8
closed
5 months ago
0
Remove libodb dependency from vcf-validator
#229
tcezard
opened
7 months ago
0
Validation of VCF4.4
#228
tcezard
opened
7 months ago
0
Strange duplicated variant problem without ref allele ?
#227
sajeevbatra
closed
3 months ago
1
MacOS validator not running on Intel Monterey
#226
maxglycine
closed
5 months ago
1
Valid missing data2
#225
sundarvenkata-EBI
closed
11 months ago
0
EVA-3338 - Missing data is valid even if multiple values are expected
#224
tcezard
closed
11 months ago
1
vcf_validator incorrectly marks missing value as error
#223
mark-lubberts
closed
11 months ago
1
vcf_validator finds only few errors at a time
#222
sozerberk
closed
1 year ago
0
Add Dockerized build for amd64/arm64 architectures
#221
dougdonohoe
opened
1 year ago
0
vcf_validator expects the wrong number of PL values
#220
zgoodwin
opened
1 year ago
0
Any chance to make this on conda
#219
yangyxt
closed
3 months ago
0
Error to validate vcf file from stacks (gstack tools reference mapping)
#218
FranciscoAscue
closed
1 year ago
2
EVA-2844 - Port linux and macOS build to Github actions
#217
apriltuesday
closed
2 years ago
0
I know this is probably obvious to you, but not me
#216
CholoTook
closed
2 years ago
0
Update install_dependencies.sh
#215
apriltuesday
closed
2 years ago
0
Error: duplicated variant
#214
sigven
opened
2 years ago
0
vcf-validator error
#213
mclr47
closed
2 years ago
1
Format of assembly report isn't clear
#212
CholoTook
opened
3 years ago
2
Star character in vcf headers
#211
V-Catherine
closed
1 year ago
2
EVA-2188 - Exit assembly checker when no Genbank synonyms are found for a contig
#210
sundarvenkata-EBI
closed
3 years ago
2
Error: Duplicated variant
#209
sebsepala
closed
3 years ago
1
Parse assigned molecule in assembly report
#208
tcezard
closed
3 years ago
1
Is underscore not allowed to be used?
#207
htchihiro
closed
3 years ago
3
remove again "brew update"
#206
jmmut
opened
3 years ago
0
EVA-2145 Improve validator documentation
#205
jmmut
closed
3 years ago
0
vcf_validator error message
#204
samarth51
closed
3 years ago
6
EVA-1731 - Fix/validate assembly checker parameters
#203
sundarvenkata-EBI
closed
4 years ago
0
Detected compression format now a debug message instead of warning
#202
cyenyxe
closed
4 years ago
1
EVA-1950 VCF validator fails to detect some duplicate variants
#201
jmmut
closed
4 years ago
1
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