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MesserLab
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SLiM
SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.
https://messerlab.org/slim/
GNU General Public License v3.0
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Fix mambaforge warning
#484
currocam
closed
1 week ago
3
Fix Windows CI (choose correct python executable)
#483
currocam
closed
1 week ago
2
"no module named pytest" error in GitHub Actions for Windows
#482
bhaller
closed
1 week ago
1
Feature idea: new methods to species regarding substitutions
#481
vsudbrack
opened
3 weeks ago
1
spatial locations outside of population bounds
#480
ShyamieG
closed
1 month ago
3
CLI progress bar or textual progress output
#479
hyanwong
opened
1 month ago
1
add support for saving computational resources used to .trees files
#478
bhaller
opened
1 month ago
1
trees tests in `multichrom` branch need updating
#477
bhaller
opened
1 month ago
0
Clicking "No" in "File has been modified externally" dialog, or failing to click soon enough, produces a relentless accumulation of more dialogs
#476
petrelharp
opened
1 month ago
4
recycling after changing the tick specification of a block if it involves an expression results in a erroneous error
#475
petrelharp
opened
1 month ago
2
Need unit tests for calc...() popgen functions
#474
bhaller
opened
1 month ago
5
(TSK_ERR_MUTATION_TIME_YOUNGER_THAN_NODE)
#473
dylandebaun
opened
1 month ago
2
Mention of Qt version hard-coded in string in CMakeLists.txt
#472
bryce-carson
closed
2 months ago
2
no cron on forks
#471
petrelharp
closed
2 months ago
0
multichromosome revisions
#470
bhaller
opened
2 months ago
0
Update SLiM.spec to work with Qt 6 for Fedora and openSUSE
#469
bryce-carson
closed
2 months ago
26
4.3 release process
#468
bhaller
closed
1 month ago
16
WSL build instructions need updating
#467
bhaller
opened
2 months ago
1
Move to nodefault conda channel in CI
#466
currocam
closed
2 months ago
2
shift installers to Qt6 for modern platforms
#465
bhaller
closed
2 months ago
5
Qt 6 shift
#464
bhaller
closed
3 months ago
1
OpenGL views don't display for some Windows users
#462
bhaller
closed
2 months ago
28
Unable to close pop-up graphs in SLiMgui Windows WSL.
#461
smolxd
closed
2 months ago
8
tests for pop name retention
#459
petrelharp
closed
4 months ago
8
inscrutible crash: memory error, probably
#458
petrelharp
closed
4 months ago
0
Fix CI in macos & move out to mamba
#457
currocam
closed
4 months ago
5
Move WSL install instructions from SLiM-Extras into the manual
#456
bhaller
closed
4 months ago
5
Use make test in CI
#455
currocam
closed
4 months ago
2
conda caching does not seem to be working for macos-13
#454
bhaller
closed
4 months ago
3
Vectorized parameters for kernel functions
#453
silastittes
closed
3 months ago
3
LogFile maybe tries to write to wrong path on Windows
#452
petrelharp
closed
4 months ago
2
wrong-ish path separator in Eidos_AbsolutePath( ) on Windows
#451
petrelharp
closed
4 months ago
6
treeSeqSimplify not recognized by SLiM
#450
bguo068
closed
4 months ago
3
Add make test feat
#449
currocam
closed
4 months ago
22
add individuals= option to treeSeqOutput() to output a sample
#448
bhaller
opened
4 months ago
2
population name inscrutibly dissappears
#447
petrelharp
closed
4 months ago
11
Trouble installing on Ubuntu 22
#446
Alan-Izarraras
closed
5 months ago
3
no gcc-11 for ubuntu-20.04, and other perhaps out-of-date Actions settings
#445
bhaller
closed
5 months ago
4
Protect early versions of CMake from using future features.
#444
bryce-carson
closed
6 months ago
3
4.2.2 release process
#443
bhaller
closed
6 months ago
9
SLiM 4.2.1 fc 3 release process
#442
bhaller
closed
6 months ago
9
Ubuntu SLiM install error
#441
NikolayOskolkov
closed
5 months ago
20
Name collision between binaries and directories prevents linking with `ld` on RHEL 8
#440
bryce-carson
closed
2 months ago
21
SLiM 4.2.1 release process
#439
bhaller
closed
7 months ago
11
provide `make test` functionality to run tests after building `slim` and `eidos`
#438
bhaller
closed
4 months ago
2
"buffer overflow detected" when trying to install SLiM on Linux
#437
alfroids
closed
7 months ago
29
QtSLiM *Open Recipe* list is sorted lexicographically rather than naturally
#436
bryce-carson
closed
4 months ago
8
Update the RPM spec version for the upcoming 4.2 release
#435
bryce-carson
closed
8 months ago
2
SLiM 4.2 release process
#434
bhaller
closed
7 months ago
23
improve recipe 17.5 by using tspop or link_ancestors
#433
bhaller
opened
8 months ago
0
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