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MesserLab
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SLiM
SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.
https://messerlab.org/slim/
GNU General Public License v3.0
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tests for pop name retention
#459
petrelharp
closed
4 days ago
8
inscrutible crash: memory error, probably
#458
petrelharp
closed
6 days ago
0
Fix CI in macos & move out to mamba
#457
currocam
closed
1 week ago
5
Move WSL install instructions from SLiM-Extras into the manual
#456
bhaller
closed
1 week ago
5
Use make test in CI
#455
currocam
closed
1 week ago
2
conda caching does not seem to be working for macos-13
#454
bhaller
closed
1 week ago
3
Vectorized parameters for kernel functions
#453
silastittes
opened
2 weeks ago
0
LogFile maybe tries to write to wrong path on Windows
#452
petrelharp
closed
1 week ago
2
wrong-ish path separator in Eidos_AbsolutePath( ) on Windows
#451
petrelharp
closed
6 days ago
6
treeSeqSimplify not recognized by SLiM
#450
bguo068
closed
3 weeks ago
3
Add make test feat
#449
currocam
closed
1 week ago
22
add individuals= option to treeSeqOutput() to output a sample
#448
bhaller
opened
3 weeks ago
2
population name inscrutibly dissappears
#447
petrelharp
closed
4 days ago
11
Trouble installing on Ubuntu 22
#446
Alan-Izarraras
closed
1 month ago
3
no gcc-11 for ubuntu-20.04, and other perhaps out-of-date Actions settings
#445
bhaller
closed
1 month ago
4
Protect early versions of CMake from using future features.
#444
bryce-carson
closed
2 months ago
3
4.2.2 release process
#443
bhaller
closed
2 months ago
9
SLiM 4.2.1 fc 3 release process
#442
bhaller
closed
2 months ago
9
Ubuntu SLiM install error
#441
NikolayOskolkov
closed
1 month ago
20
Name collision between binaries and directories prevents linking with `ld` on RHEL 8
#440
bryce-carson
opened
3 months ago
11
SLiM 4.2.1 release process
#439
bhaller
closed
3 months ago
11
provide `make test` functionality to run tests after building `slim` and `eidos`
#438
bhaller
closed
1 week ago
2
"buffer overflow detected" when trying to install SLiM on Linux
#437
alfroids
closed
3 months ago
29
QtSLiM *Open Recipe* list is sorted lexicographically rather than naturally
#436
bryce-carson
closed
1 week ago
8
Update the RPM spec version for the upcoming 4.2 release
#435
bryce-carson
closed
4 months ago
2
SLiM 4.2 release process
#434
bhaller
closed
3 months ago
23
improve recipe 17.5 by using tspop or link_ancestors
#433
bhaller
opened
4 months ago
0
Software depends on Qt patch version?
#432
iago-lito
closed
4 months ago
7
Compiling Eidos script.
#431
iago-lito
opened
4 months ago
13
Inconsistent global-variable behavior from `x = 1` versus `x = x + 1`
#430
bhaller
closed
5 months ago
11
"pretty" option for serialize()
#429
jiseonmin
closed
5 months ago
2
missing parents when using addRecombinant()
#428
ShyamieG
closed
5 months ago
2
small bug in docs
#427
petrelharp
closed
5 months ago
1
Add contig header to VCF
#426
currocam
closed
5 months ago
1
Slim 4.1 core dumping on computing cluster
#425
evromero-uw
closed
4 months ago
19
Wrap Eidos code edition/analysis features into a proper language server.
#424
iago-lito
opened
5 months ago
1
SLiMgui should offer to load external script changes
#423
bhaller
closed
5 months ago
7
4.1 Memory Issue
#422
ans6160
closed
6 months ago
6
EidosValue design overhaul
#421
bhaller
closed
7 months ago
0
add node pedigree ID check
#420
bhaller
closed
7 months ago
5
genome id mismatch error with SLiM 4.1
#419
ShyamieG
closed
7 months ago
29
segmentation fault after addCloned() or takeMigrants() with haploids
#418
ShyamieG
closed
7 months ago
6
Update README.md
#417
bryce-carson
closed
7 months ago
0
error adding individuals to table
#416
ShyamieG
closed
7 months ago
14
SLiM 4.1 release process
#415
bhaller
closed
7 months ago
29
Update README.md
#414
bryce-carson
closed
7 months ago
14
Use CMake to perform installation, and RPM macros
#413
bryce-carson
closed
7 months ago
2
Re-enable parallel SLiM
#412
bhaller
opened
7 months ago
0
RHEL 8 cluster, SLiMgui Segmentation fault; QOpenGLWidget: Failed to make context current, QOpenGLShaderProgram: could not create shader program
#411
SomePersonSomeWhereInTheWorld
closed
8 months ago
2
Added functions for extracting upper and lower triangles of matrices
#410
nobrien97
closed
8 months ago
9
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