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MouseLand
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suite2p
cell detection in calcium imaging recordings
http://www.suite2p.org
GNU General Public License v3.0
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New s2p version cannot handle lists of h5 files
#1149
oterocoronel
opened
2 days ago
0
BUG: Bruker input using Ch2 only.
#1148
LABell2842
opened
2 days ago
0
BUG: <Please write a comprehensive title after the 'BUG: ' prefix>
#1147
mmzinn12
opened
4 days ago
0
Dummy PR for review
#1146
Zachary-Ip
opened
1 week ago
0
ROI detection wrapper modifies the input images and consequently, can't detect ROIs
#1145
harinisuri
opened
2 weeks ago
0
Registration metrics do not exclude bad frames
#1144
samupicard
opened
1 month ago
1
BUG: Merge ROI not working
#1143
ycYiwei
opened
1 month ago
0
Menu bar in GUI is invisible
#1142
Mengya-W
opened
1 month ago
0
Error in GUI - Space in Users name
#1141
AMlsct
closed
1 month ago
1
BUG: Cannot load suite2p image into suite2p UI. Divide by 0 error
#1140
arielleleon
opened
1 month ago
0
BUG: <Please write a comprehensive title after the 'BUG: ' prefix> Significantly higher fluorescence values in Suite2p in images collected thru Scanimage and saved in imageJ
#1139
niraulasuraj9
opened
1 month ago
0
BUG: Suite2P gui not saving update to NWB file
#1138
JohnStout
opened
2 months ago
0
BUG: Can't manually label ROIs on the mean image of a second channel, only over the mean image of the first channel
#1135
ShayMeAs
opened
2 months ago
0
BUG: UnboundLocalError: local variable 'meanImg_chan2' referenced before assignment
#1133
GiangTranHU
opened
3 months ago
0
BUG: Large OME.TIFF files not registering
#1131
nhanford199
opened
3 months ago
0
BUG: Unable to visualize selected cells for rastermap plots
#1130
C57B6J
opened
3 months ago
0
Merging to newest version
#1129
tbabola
closed
3 months ago
0
Issues with installation of suite2p
#1128
GiangTranHU
opened
3 months ago
8
BUG: Value error after manual labelling extraction
#1127
Nique19351
opened
3 months ago
1
BUG: Functional channel not being assigned to channel 2
#1126
jordanfarrell
opened
4 months ago
0
BUG: ROI coordinates shifted in y-axis with respect to manually-drawn Ellipse
#1125
yzerlaut
opened
4 months ago
1
BUG: 1P masks not aligning, issue of average image?
#1124
jackbrougher
opened
4 months ago
0
ValueError: operands could not be broadcast together with shapes
#1123
C57B6J
closed
3 months ago
1
Bug fix for python 3.11 and over
#1122
calebshibu
opened
4 months ago
1
functional segmentation of GCaMP8m
#1120
ftomaska
opened
5 months ago
0
initial implementation of isxd reading
#1119
ludovicbellier
closed
5 months ago
0
Imaging with Fluo-4
#1118
marytunun
opened
5 months ago
0
FEATURE: ROI registration and interpretation of
#1116
eunjoy21
opened
5 months ago
0
FEATURE: ROI registration
#1115
eunjoy21
opened
6 months ago
1
BUG: Partial analysis on subset of data does not work
#1113
knowblesse
opened
6 months ago
0
force integer value for `np.arange` when indexing h5 file with 4D and 5D data
#1112
knowblesse
opened
6 months ago
1
BUG: Can not handle an h5 file with 5D data structure
#1111
knowblesse
opened
6 months ago
3
DOC: some readthedocs.io links to API are broken
#1110
neurochatter
opened
6 months ago
0
BUG: sbx_to_binary computes nframes incorrectly with multiple channels if longer than batch_size frames
#1109
ethanbb
opened
6 months ago
2
BUG: model_path() takes from 1 to 2 positional arguments but 3 were given
#1108
lea-danics
closed
6 months ago
3
qt.qpa.plugin error after installation (no root privileges)
#1107
batuhanerkat
opened
7 months ago
0
Update zalign.py
#1106
liadJB
closed
7 months ago
0
Error when run ops file
#1105
KKroba
closed
6 months ago
4
Don't show ROIS in main screen
#1104
KKroba
closed
6 months ago
3
BUG: error when running suite2p
#1103
Monodia97
closed
6 months ago
2
BUG: error in anatomical detection using cellpose 3
#1101
nguyemi5
closed
7 months ago
1
support for dcimg
#1100
nguyemi5
closed
7 months ago
1
Deconvolution for RGECO neuronal signal
#1099
ZiTao956
opened
7 months ago
0
FEATURE: operating extraction on cropped region
#1098
jingxuanf0214
closed
5 months ago
2
Bug: Merge ROIs duplicates
#1097
sdaste
opened
7 months ago
0
Installing using pip on source results in OSError:...libScanImageTiffReaderAPI.so: cannot open shared object file: No such file or directory
#1096
paulgarias
opened
7 months ago
0
Tiff ValueError: the total number of frames should be at least 50. RAW to TIFF conversion in Fiji
#1095
rsymzk
closed
7 months ago
2
BUG: Unable to extract dendritic ROIs
#1094
seethakris
opened
7 months ago
0
TypeError: model_path() in rungui.py on newly installed suite2p
#1093
IreneP19
closed
7 months ago
5
RECOMMENDATION: Processing multi plane images with different types of structures
#1092
GergelyTuri
opened
7 months ago
0
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