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A repo for tracking gaps in Translator data and finding ways to fill them.
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incorrect logic for treatment
#802
gglusman
opened
3 months ago
3
no supporting paths
#801
gglusman
closed
2 months ago
2
What may downregulate GCG - does not return semaglutide
#800
TranslatorIssueCreator
closed
2 months ago
1
Does this support graph support the question?
#799
sstemann
closed
1 month ago
3
This is a fascinating tool that allows the user many opportunities to link together commonalities within a disease. I have an ultra-rare degenerative brain disease that is largely still unknown. Using this tool I can help researchers quickly determine how my specific variant of the gene manifests itself in me. This changes science forever. WOW!
#798
TranslatorIssueCreator
closed
1 month ago
1
Update UI to Indicate when a returned path ends in a sub-class of the input
#797
sstemann
opened
3 months ago
2
Prioritize use of LLMs to improve ordering of pubs, snippet display, and pub based scoring for text-mined results
#796
mbrush
opened
3 months ago
3
Why are we seeing significantly fewer support paths returned in the UI now (compared to 9 months months ago)?
#795
mbrush
opened
3 months ago
2
Bring paths to the top of the list that meet a criteria from a facet
#794
mbrush
opened
3 months ago
8
Change "paths that may treat conditions related to" phrasing under each result in the UI
#793
mbrush
opened
3 months ago
8
The Annotator service doesn't have a listed infores in its openapi
#792
maximusunc
opened
3 months ago
5
Display ARS results derived from CQS in UI
#791
TranslatorIssueCreator
closed
2 months ago
4
ARS Test Instance Rejects Async Returns
#790
MarkDWilliams
closed
3 months ago
2
Were these paths supposed to be merged?
#789
sstemann
closed
4 weeks ago
5
PathWhiz/Reactome in Paths
#788
sstemann
closed
4 weeks ago
15
Broader Category of Input Node for MVP2
#787
sstemann
closed
3 months ago
4
Reads Diabetes <Treats or Applied or Study to Treat> Compound Name
#786
sstemann
closed
3 months ago
8
Nitric Oxide 0.08 % Paths for MODY
#785
sstemann
closed
3 months ago
8
Messenger RNA Evidence for MODY
#784
sstemann
closed
3 months ago
13
Why is this one scored 5.0?
#783
sstemann
closed
3 months ago
5
MVP2 - What genes' activity is up/downregulated - Changes to the input node
#782
sstemann
closed
3 months ago
2
MVP2 - Gene Results by Organism
#781
sstemann
opened
4 months ago
6
Compound variations
#780
sstemann
closed
3 months ago
2
Nameunknown Node
#779
sstemann
closed
3 months ago
14
Compounds Part of some version of the same Compound that has part Starting Compound - Is this intentional?
#778
sstemann
closed
3 months ago
2
Number of Path Calculations
#777
sstemann
closed
4 months ago
1
Inferred within Inferred
#776
sstemann
closed
4 weeks ago
21
One Hop Inferred with the same predicate as the lookup path
#775
sstemann
closed
3 months ago
13
X treats 'adverse drug response' to X
#774
gglusman
closed
4 weeks ago
6
Amino acid sequence instead of human readable label for TNF-alpha
#773
khanspers
closed
2 months ago
2
Example of Weird ordering/ranking MVP1 GERD
#772
khanspers
opened
4 months ago
8
Many results are returned more than once for What treats headache
#771
khanspers
closed
2 months ago
2
NeverShow: Metric treats Multiple Sclerosis Automated Failure
#770
cbizon
opened
5 months ago
4
Improving Agent as Lookup EPC
#769
sstemann
closed
2 months ago
2
when automated issue reporting from UI leads to 2 different queries
#768
sandrine-muller-research
closed
2 months ago
1
IDs not merged correctly leading to duplicative results
#767
TranslatorIssueCreator
closed
2 months ago
4
two-hop answers come ahead of one-hop answers (particularly around a gene "hub") - why?
#766
TranslatorIssueCreator
opened
5 months ago
3
Example of issue with ranking (O&O): MVP2 Bivalirudin
#765
TranslatorIssueCreator
closed
4 weeks ago
15
thrombin and F2 should be normalized to a single node
#764
TranslatorIssueCreator
opened
5 months ago
3
lookup result not accurate
#763
TranslatorIssueCreator
closed
3 months ago
3
X - decreases Y - decreases Z != X decreases Z
#762
TranslatorIssueCreator
opened
5 months ago
3
biolink:regulates for chemical-to-gene relationships
#761
TranslatorIssueCreator
closed
2 months ago
3
CHEMBL.TARGET:CHEMBL204 "UNIPROTKB:P00734" should not be preferred name, Prothrombin should be
#760
TranslatorIssueCreator
opened
5 months ago
7
Pubchem Name - Can another name be used once its too long?
#759
sstemann
closed
4 weeks ago
6
inferred edge "affected_by" while all predicates in reasoning are "has_increased activity or abundance"
#758
TranslatorIssueCreator
opened
5 months ago
10
There are two results for Levothyroxine, which should be combined. https://ui.transltr.io/main/results?l=Hypothyroidism&i=MONDO:0005420&t=0&r=0&q=3b2da60c-9056-43f5-9001-ce9ec1cb3294
#757
TranslatorIssueCreator
closed
2 months ago
3
Graph View - Paths of Selected Node - the Graying is maybe too subtle?
#756
sstemann
closed
4 months ago
3
LAMA3 should not be upregulated by acetylcholine - directed edge logic mismatch
#755
TranslatorIssueCreator
opened
5 months ago
8
small molecules are returned while genes are asked
#754
TranslatorIssueCreator
closed
2 months ago
4
NG-NITROARGININE METHYL ESTER is not a gene
#753
TranslatorIssueCreator
opened
5 months ago
7
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